RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 CUBNO60494 3623 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 IGLV4-3A0A075B6K6 122 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 TRAV25A0A0B4J276 109 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 FHL3Q13643 280 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 UFSP1Q6NVU6 142 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 PDZD2O15018 2839 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 IGLL5B9A064 214 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 C1orf158Q8N1D5 194 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 SMR3AQ99954 134 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 SPXQ9BT56 116 aa7.23□□□□□ -1.25
LINC00494-201ENST00000416742 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
LINC00494-201ENST00000416742 LGALS3P17931 250 aaKnown RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 ZNF418Q8TF45 676 aaPredicted RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 ZNF479Q96JC4 524 aa7.22□□□□□ -1.25
LINC00494-201ENST00000416742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 IGKV2-29A2NJV5 120 aaPredicted RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 RPL35AP18077 110 aaKnown RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 WFDC10AQ9H1F0 79 aa7.22□□□□□ -1.25
LINC00494-201ENST00000416742 J3QQQ9 107 aa7.22□□□□□ -1.25
LINC00494-201ENST00000416742 RNASE1P07998 156 aaKnown RBP7.22□□□□□ -1.25
LINC00494-201ENST00000416742 UNC79Q9P2D8 2635 aa7.22□□□□□ -1.25
LINC00494-201ENST00000416742 OCIAD2Q56VL3 154 aa7.21□□□□□ -1.25
LINC00494-201ENST00000416742 FN1P02751 2386 aaKnown RBP7.21□□□□□ -1.26
LINC00494-201ENST00000416742 RHODO00212 210 aa7.21□□□□□ -1.26
LINC00494-201ENST00000416742 APOMO95445 188 aa7.21□□□□□ -1.26
LINC00494-201ENST00000416742 CBY1Q9Y3M2 126 aa7.21□□□□□ -1.26
LINC00494-201ENST00000416742 HECTD1Q9ULT8 2610 aa7.21□□□□□ -1.26
LINC00494-201ENST00000416742 NIPBLQ6KC79 2804 aaeCLIP7.21□□□□□ -1.26
LINC00494-201ENST00000416742 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
LINC00494-201ENST00000416742 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
LINC00494-201ENST00000416742 SFTA2Q6UW10 78 aa7.2□□□□□ -1.26
LINC00494-201ENST00000416742 NFE4Q86UQ8 179 aa7.2□□□□□ -1.26
LINC00494-201ENST00000416742 A0A0J9YY99 117 aa7.2□□□□□ -1.26
LINC00494-201ENST00000416742 RS1O15537 224 aa7.2□□□□□ -1.26
LINC00494-201ENST00000416742 COTL1Q14019 142 aa7.2□□□□□ -1.26
LINC00494-201ENST00000416742 RBX1P62877 108 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
LINC00494-201ENST00000416742 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 BEAN1Q3B7T3 259 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 Q6ZTI0 123 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 VPS25Q9BRG1 176 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 EDA2RQ9HAV5 297 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 PIK3CD-AS1Q5SR53 167 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 DGAT2L7PQ6IED9 249 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 LINC00467Q9BRT7 94 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 CHCHD7Q9BUK0 85 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 C16orf95Q9H693 158 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
LINC00494-201ENST00000416742 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
LINC00494-201ENST00000416742 RRN3P1Q2M238 152 aa7.18□□□□□ -1.26
LINC00494-201ENST00000416742 NOP10Q9NPE3 64 aaKnown RBP7.18□□□□□ -1.26
LINC00494-201ENST00000416742 SETXQ7Z333 2677 aaKnown RBP7.18□□□□□ -1.26
LINC00494-201ENST00000416742 LEPROTO15243 131 aa7.18□□□□□ -1.26
LINC00494-201ENST00000416742 PYGO1Q9Y3Y4 419 aa7.18□□□□□ -1.26
LINC00494-201ENST00000416742 PTH2Q96A98 100 aa7.18□□□□□ -1.26
LINC00494-201ENST00000416742 TRAV8-3A0A0A6YYJ7 113 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 K7ERU9 68 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 HILS1P60008 231 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 RPL24P83731 157 aaKnown RBP7.17□□□□□ -1.26
LINC00494-201ENST00000416742 DNAJC30Q96LL9 226 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 CLUHP3Q96NS8 147 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 H3BMG7 143 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 Q6ZUT4 128 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 MTURNQ8N3F0 131 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 LOC107984156A0A0G2JMH3 177 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 ARL17AQ8IVW1 177 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 AMELXQ99217 191 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
LINC00494-201ENST00000416742 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE12JA6NER3 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE7O76087 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 IGLV1-51P01701 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE12FP0CL80 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE12GP0CL81 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE12IP0CL82 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE4Q13068 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE5Q13069 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 GAGE13Q4V321 117 aa7.16□□□□□ -1.26
LINC00494-201ENST00000416742 TMEM263Q8WUH6 116 aaKnown RBP7.16□□□□□ -1.26
LINC00494-201ENST00000416742 A0A1B0GWB2 263 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.26
LINC00494-201ENST00000416742 GEMIN7Q9H840 131 aaKnown RBP7.15□□□□□ -1.26
LINC00494-201ENST00000416742 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 A8MZ25 164 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 SPINK8P0C7L1 97 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
LINC00494-201ENST00000416742 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.26
LINC00494-201ENST00000416742 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.26
LINC00494-201ENST00000416742 PF4P02776 101 aa7.15□□□□□ -1.27
LINC00494-201ENST00000416742 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
LINC00494-201ENST00000416742 UBE2D1P51668 147 aa7.14□□□□□ -1.27
LINC00494-201ENST00000416742 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
LINC00494-201ENST00000416742 WFDC2Q14508 124 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms