RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CD7P09564 240 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
RFFL-205ENST00000415395 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
RFFL-205ENST00000415395 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
RFFL-205ENST00000415395 C1QTNF4Q9BXJ3 329 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 A0A1B0GV72 72 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 ODF3L2Q3SX64 289 aa8.49□□□□□ -1.05
RFFL-205ENST00000415395 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
RFFL-205ENST00000415395 SORL1Q92673 2214 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 LOC107984156A0A0G2JMH3 177 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 LINC00315P59091 139 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 ARL17AQ8IVW1 177 aa8.48□□□□□ -1.05
RFFL-205ENST00000415395 AGRNO00468 2067 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 A0A0J9YY99 117 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 TSPAN13O95857 204 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 CRYGDP07320 174 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 UBE2D3P61077 147 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 UBE2D2P62837 147 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 ZNF876PQ49A33 203 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 MTURNQ8N3F0 131 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 SLC25A29Q8N8R3 303 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 GTSF1LQ9H1H1 148 aa8.47□□□□□ -1.05
RFFL-205ENST00000415395 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 PSMB2P49721 201 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 ZNF56Q15929 161 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 SH2D6Q7Z4S9 175 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.05
RFFL-205ENST00000415395 IGHV3-16A0A0C4DH30 117 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 J3QQQ9 107 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 LEPROTO15243 131 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 FOXI1Q12951 378 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 KRTAP24-1Q3LI83 254 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 STHQ8IWL8 128 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
RFFL-205ENST00000415395 TEP1Q99973 2627 aaKnown RBP8.45□□□□□ -1.06
RFFL-205ENST00000415395 A0A087WWL8 130 aa8.45□□□□□ -1.06
RFFL-205ENST00000415395 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
RFFL-205ENST00000415395 TRAV12-3A0A0B4J271 114 aa8.45□□□□□ -1.06
RFFL-205ENST00000415395 TSHBP01222 138 aa8.45□□□□□ -1.06
RFFL-205ENST00000415395 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
RFFL-205ENST00000415395 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
RFFL-205ENST00000415395 JMJD1CQ15652 2540 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
RFFL-205ENST00000415395 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
RFFL-205ENST00000415395 A8MWV9 139 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 I3L3M4 83 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 SPRY2O43597 315 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 IGHV3-30P01768 117 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
RFFL-205ENST00000415395 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 CRYBA4P53673 196 aa8.44□□□□□ -1.06
RFFL-205ENST00000415395 TRAV12-2A0A075B6T6 113 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 M0QXV9 152 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 WFDC9Q8NEX5 89 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 C19orf73Q9NVV2 129 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 TMEM262E9PQX1 116 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 M0QY20 66 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 RPL39P62891 51 aaKnown RBP8.43□□□□□ -1.06
RFFL-205ENST00000415395 EDA2RQ9HAV5 297 aa8.43□□□□□ -1.06
RFFL-205ENST00000415395 A0A0B4J2C4 111 aa8.42□□□□□ -1.06
RFFL-205ENST00000415395 TMEM223A0PJW6 202 aa8.42□□□□□ -1.06
RFFL-205ENST00000415395 WIPF1O43516 503 aa8.42□□□□□ -1.06
RFFL-205ENST00000415395 INSP01308 110 aa8.42□□□□□ -1.06
RFFL-205ENST00000415395 ATRQ13535 2644 aa8.42□□□□□ -1.06
RFFL-205ENST00000415395 TENM1Q9UKZ4 2725 aa8.41□□□□□ -1.06
RFFL-205ENST00000415395 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
RFFL-205ENST00000415395 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
RFFL-205ENST00000415395 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
RFFL-205ENST00000415395 CFC1BP0CG36 223 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 CFC1P0CG37 223 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 EMP1P54849 157 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 SBSPONQ8IVN8 264 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 ZNRF2Q8NHG8 242 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 JPT2Q9H910 190 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 MUC4Q99102 2169 aa8.4□□□□□ -1.06
RFFL-205ENST00000415395 RHODO00212 210 aa8.4□□□□□ -1.07
RFFL-205ENST00000415395 P0DMU3 169 aa8.4□□□□□ -1.07
RFFL-205ENST00000415395 FAM231AP0DMU4 169 aa8.4□□□□□ -1.07
RFFL-205ENST00000415395 FAM231CP0DMU5 169 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms