RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 NUPR1O60356 82 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV3-30P01768 117 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV3-33P01772 117 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 IGHV3-30-5P0DP03 117 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 AVPP01185 164 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 GAGE2AQ6NT46 116 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 HIST2H2BCQ6DN03 193 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
PTPRF-205ENST00000414879 TRBV27A0A0K0K1C4 114 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 CFAP126Q5VTH2 177 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 KIAA1549Q9HCM3 1950 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 A0A1W2PPR1 153 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 ACYP1P07311 99 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 HCFC1P51610 2035 aa8.9□□□□□ -0.98
PTPRF-205ENST00000414879 M0QY20 66 aa8.9□□□□□ -0.99
PTPRF-205ENST00000414879 CRIP1P50238 77 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 TRAV10A0A0B4J240 114 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 TIRAPP58753 221 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 KLK12Q9UKR0 248 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
PTPRF-205ENST00000414879 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
PTPRF-205ENST00000414879 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 TP53TG3Q9ULZ0 132 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 CCDC168Q8NDH2 2452 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
PTPRF-205ENST00000414879 RBMY1FQ15415 496 aaKnown RBP8.88□□□□□ -0.99
PTPRF-205ENST00000414879 ZNF124Q15973 351 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 C10orf99Q6UWK7 81 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 TRAV26-1A0A087WT03 109 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 NACAE9PAV3 2078 aa8.88□□□□□ -0.99
PTPRF-205ENST00000414879 DEFB131BA0A096LNP1 70 aa8.87□□□□□ -0.99
PTPRF-205ENST00000414879 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
PTPRF-205ENST00000414879 K7EP13 123 aa8.87□□□□□ -0.99
PTPRF-205ENST00000414879 KRTAP10-9P60411 292 aa8.87□□□□□ -0.99
PTPRF-205ENST00000414879 RPL18AQ02543 176 aaKnown RBP8.87□□□□□ -0.99
PTPRF-205ENST00000414879 IGLV10-54A0A075B6I4 117 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 TRBV6-8A0A0A6YYG3 113 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 A4D1N5 150 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 HIST1H4AP62805 103 aaKnown RBP8.86□□□□□ -0.99
PTPRF-205ENST00000414879 PIEZO2Q9H5I5 2752 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 MAJINQ3KP22 176 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 GDF5OSQ5U4N7 250 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 IGLL5B9A064 214 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 IGLV1-51P01701 117 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 OCIAD2Q56VL3 154 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
PTPRF-205ENST00000414879 YPEL4Q96NS1 127 aa8.86□□□□□ -0.99
PTPRF-205ENST00000414879 REG3AQ06141 175 aa8.85□□□□□ -0.99
PTPRF-205ENST00000414879 Q6ZUT4 128 aa8.85□□□□□ -0.99
PTPRF-205ENST00000414879 RNF185Q96GF1 192 aa8.85□□□□□ -0.99
PTPRF-205ENST00000414879 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
PTPRF-205ENST00000414879 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
PTPRF-205ENST00000414879 DEFB4AO15263 64 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 SONP18583 2426 aaKnown RBP8.84□□□□□ -0.99
PTPRF-205ENST00000414879 Q6ZS46 218 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 FRMD6-AS1P0C7T7 363 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 Q8N2B8 174 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 PTH2Q96A98 100 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 LINC00467Q9BRT7 94 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 ESM1Q9NQ30 184 aa8.84□□□□□ -0.99
PTPRF-205ENST00000414879 JMJD7-PLA2G4BH0Y9G9 81 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 MIAQ16674 131 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 NFE4Q86UQ8 179 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 GAGE12HA6NDE8 117 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 PDE6GP18545 87 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
PTPRF-205ENST00000414879 ETDBQ3ZM63 59 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 CHCHD7Q9BUK0 85 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 IBA57-AS1B1ANH7 110 aa8.83□□□□□ -1
PTPRF-205ENST00000414879 SPANXCQ9NY87 97 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 IGHV4-28A0A0C4DH34 117 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 DIRC1Q969H9 104 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 MKI67P46013 3256 aaKnown RBP8.82□□□□□ -1
PTPRF-205ENST00000414879 H3BT86 120 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 K7ERJ3 54 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
PTPRF-205ENST00000414879 LELP1Q5T871 98 aa8.82□□□□□ -1
PTPRF-205ENST00000414879 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
PTPRF-205ENST00000414879 A0A0B4J2C4 111 aa8.81□□□□□ -1
PTPRF-205ENST00000414879 H3BMG7 143 aa8.81□□□□□ -1
PTPRF-205ENST00000414879 PCSK5Q92824 1860 aa8.81□□□□□ -1
PTPRF-205ENST00000414879 TIMM17BO60830 172 aa8.81□□□□□ -1
PTPRF-205ENST00000414879 HIVEP3Q5T1R4 2406 aa8.81□□□□□ -1
PTPRF-205ENST00000414879 ANKRD11Q6UB99 2663 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms