RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 D6R8Y8 96 aa9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 HOXA5P20719 270 aa9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 DEFB104AQ8WTQ1 72 aa9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 PRELID3AQ96N28 172 aa9.26□□□□□ -0.93
RAPGEF1-204ENST00000414781 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 TRGC2P03986 189 aa9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 ST20Q9HBF5 79 aa9.25□□□□□ -0.93
RAPGEF1-204ENST00000414781 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 TRBV6-5A0A0K0K1A5 114 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 MRPL23Q16540 153 aaKnown RBP9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 KIAA1644Q3SXP7 199 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
RAPGEF1-204ENST00000414781 C1orf196B1AJZ1 125 aa9.23□□□□□ -0.93
RAPGEF1-204ENST00000414781 GYPEP15421 78 aa9.23□□□□□ -0.93
RAPGEF1-204ENST00000414781 Q6ZRN7 208 aaPredicted RBP9.23□□□□□ -0.93
RAPGEF1-204ENST00000414781 ALKBH7Q9BT30 221 aaPredicted RBP9.23□□□□□ -0.93
RAPGEF1-204ENST00000414781 MAP1LC3AQ9H492 121 aa9.23□□□□□ -0.93
RAPGEF1-204ENST00000414781 A0A0J9YY99 117 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 SMKR1H3BMG3 65 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 VCYO14598 125 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 TCAPO15273 167 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 NCR2O95944 276 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 SRIP30626 198 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 SUMO2P61956 95 aaKnown RBP9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 NRACQ8N912 160 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 ICOSQ9Y6W8 199 aa9.22□□□□□ -0.93
RAPGEF1-204ENST00000414781 GAGE12JA6NER3 117 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 PRSS47A8MTI9 375 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 OXTP01178 125 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 PMCHP20382 165 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 GCSHP23434 173 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 GAGE1Q13065 139 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 GAGE4Q13068 117 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 GAGE5Q13069 117 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 GAGE13Q4V321 117 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 TMEM97Q5BJF2 176 aa9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 RPL39LQ96EH5 51 aaKnown RBP9.21□□□□□ -0.94
RAPGEF1-204ENST00000414781 SDHAF1A6NFY7 115 aa9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 NPYP01303 97 aa9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 RAB5BP61020 215 aa9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
RAPGEF1-204ENST00000414781 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 I3L3M4 83 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 K7EMI3 77 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 UBE2D3P61077 147 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 UBE2D2P62837 147 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 NEGR1Q7Z3B1 354 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 ATP6V0E2Q8NHE4 81 aa9.19□□□□□ -0.94
RAPGEF1-204ENST00000414781 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
RAPGEF1-204ENST00000414781 G0S2P27469 103 aa9.18□□□□□ -0.94
RAPGEF1-204ENST00000414781 Q0VG73 95 aa9.18□□□□□ -0.94
RAPGEF1-204ENST00000414781 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
RAPGEF1-204ENST00000414781 LOC100131303A0A0U1RQF7 123 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 LOC389332A0A1B0GUA5 103 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 HAMPP81172 84 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 COTL1Q14019 142 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 Q8N8P6 123 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 C18orf32Q8TCD1 76 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
RAPGEF1-204ENST00000414781 A0A087WTM6 91 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 A0A096LPF7 62 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 LINC00694P0DN24 101 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 FCER1GP30273 86 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 TIRAPP58753 221 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 GTSF1LQ9H1H1 148 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 Q9UF83 564 aa9.16□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BKO60814 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BJP06899 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 LINC00614P0C842 121 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BOP23527 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BBP33778 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BDP58876 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BCP62807 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST2H2BEQ16778 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BHQ93079 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BNQ99877 126 aa9.15□□□□□ -0.94
RAPGEF1-204ENST00000414781 HIST1H2BMQ99879 126 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms