RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 KLK12Q9UKR0 248 aa8.14□□□□□ -1.11
SCN5A-204ENST00000414099 Q6ZSR3 168 aa8.14□□□□□ -1.11
SCN5A-204ENST00000414099 A6NDX4 124 aa8.14□□□□□ -1.11
SCN5A-204ENST00000414099 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
SCN5A-204ENST00000414099 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
SCN5A-204ENST00000414099 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
SCN5A-204ENST00000414099 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
SCN5A-204ENST00000414099 SIRPDQ9H106 197 aa8.13□□□□□ -1.11
SCN5A-204ENST00000414099 PIEZO1Q92508 2521 aa8.13□□□□□ -1.11
SCN5A-204ENST00000414099 ARTNQ5T4W7 220 aa8.13□□□□□ -1.11
SCN5A-204ENST00000414099 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
SCN5A-204ENST00000414099 NOTCH2Q04721 2471 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 MIFP14174 115 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 Q6YL49 198 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 IGLV1-47P01700 117 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
SCN5A-204ENST00000414099 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
SCN5A-204ENST00000414099 ZFP36P26651 326 aaKnown RBP8.11□□□□□ -1.11
SCN5A-204ENST00000414099 PTPRBP23467 1997 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 A0A0J9YX75 114 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 MAP6D1Q9H9H5 199 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 ODF1Q14990 250 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 LRRK2Q5S007 2527 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 FXYD2P54710 66 aa8.11□□□□□ -1.11
SCN5A-204ENST00000414099 CRYGDP07320 174 aa8.1□□□□□ -1.11
SCN5A-204ENST00000414099 RPL39P62891 51 aaKnown RBP8.1□□□□□ -1.11
SCN5A-204ENST00000414099 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
SCN5A-204ENST00000414099 NRGNQ92686 78 aa8.1□□□□□ -1.11
SCN5A-204ENST00000414099 Q8N7P7 452 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 RITA1Q96K30 269 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 HIVEP3Q5T1R4 2406 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 WFDC2Q14508 124 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 DAND5Q8N907 189 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 SPRNQ5BIV9 151 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 REG3AQ06141 175 aa8.09□□□□□ -1.11
SCN5A-204ENST00000414099 DEFB131BA0A096LNP1 70 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 GTSF1Q8WW33 167 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 SPRY4Q9C004 299 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 FAM167A-AS1Q96KT0 104 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 UBE2D1P51668 147 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 ZNF524Q96C55 264 aa8.08□□□□□ -1.12
SCN5A-204ENST00000414099 IGF1P05019 195 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 Q8NA96 180 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 MUC7Q8TAX7 377 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 ASPHD1Q5U4P2 390 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 TRAV26-1A0A087WT03 109 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 SPATA12Q7Z6I5 190 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
SCN5A-204ENST00000414099 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 P0DMU3 169 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 FAM231AP0DMU4 169 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 FAM231CP0DMU5 169 aa8.07□□□□□ -1.12
SCN5A-204ENST00000414099 MYO9AB2RTY4 2548 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 ZFYVE26Q68DK2 2539 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 ESM1Q9NQ30 184 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 TRAV10A0A0B4J240 114 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 IMUPQ9GZP8 106 aa8.06□□□□□ -1.12
SCN5A-204ENST00000414099 PATE2Q6UY27 113 aa8.05□□□□□ -1.12
SCN5A-204ENST00000414099 LINC00574Q9H8X3 128 aa8.05□□□□□ -1.12
SCN5A-204ENST00000414099 ODF3BA8MYP8 253 aa8.05□□□□□ -1.12
SCN5A-204ENST00000414099 TCL1BO95988 128 aa8.05□□□□□ -1.12
SCN5A-204ENST00000414099 LINC00474Q9P2X8 69 aa8.05□□□□□ -1.12
SCN5A-204ENST00000414099 HIGD2AQ9BW72 106 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 MSRB1Q9NZV6 116 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 A0A087WZ39 114 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 DEFB4AO15263 64 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 TIMM17BO60830 172 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 C19orf71A6NCJ1 209 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 LMO4P61968 165 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 LINC00269Q8N2A0 174 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 CHCHD10Q8WYQ3 142 aaPredicted RBP8.04□□□□□ -1.12
SCN5A-204ENST00000414099 INAFM1C9JVW0 142 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 FAM222AQ5U5X8 452 aa8.04□□□□□ -1.12
SCN5A-204ENST00000414099 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
SCN5A-204ENST00000414099 DEFB114Q30KQ6 69 aa8.03□□□□□ -1.12
SCN5A-204ENST00000414099 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
SCN5A-204ENST00000414099 COX17Q14061 63 aa8.03□□□□□ -1.12
SCN5A-204ENST00000414099 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
SCN5A-204ENST00000414099 MRPS36P82909 103 aaKnown RBP8.02□□□□□ -1.13
SCN5A-204ENST00000414099 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
SCN5A-204ENST00000414099 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
SCN5A-204ENST00000414099 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
SCN5A-204ENST00000414099 UNQ9165/PRO28630Q6UXU0 137 aa8.01□□□□□ -1.13
SCN5A-204ENST00000414099 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
SCN5A-204ENST00000414099 WFDC10BQ8IUB3 73 aa8.01□□□□□ -1.13
SCN5A-204ENST00000414099 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms