RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C18orf32Q8TCD1 76 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 BLNKQ8WV28 456 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 C22orf15Q8WYQ4 148 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 FMC1Q96HJ9 113 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 C12orf57Q99622 126 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CNFNQ9BYD5 112 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 LINC00527Q9UJ94 153 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 ITPR3Q14573 2671 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 CRYBG3Q68DQ2 2970 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZFHX3Q15911 3703 aa1.66□□□□□ -2.14
HMGB1P11-201ENST00000413899 ASH1LQ9NR48 2969 aaKnown RBP1.65□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM208BQ5VWN6 2430 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAV30A0A087WSZ9 112 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAV8-4A0A0B4J246 113 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAV8-6A0A0B4J262 113 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TMEM213A2RRL7 107 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 HIGD1CA8MV81 97 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 ZNF705FA8MVS1 300 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 A8MWP6 167 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 B4DSR2 109 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 H3BUA1 57 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 J3QLI3 93 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 GATCO43716 136 aaKnown RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 SH2D1AO60880 128 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 CNIH1O95406 144 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 P01737 135 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 ARMS2P0C7Q2 107 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 MGST1P10620 155 aaKnown RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 COX6B1P14854 86 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 BRS3P32247 399 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 AKR1D1P51857 326 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 FOXA3P55318 350 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TPPP2P59282 170 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 ATP5G2Q06055 141 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 Q0VG73 95 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 JOSD1Q15040 202 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 IQCJQ1A5X6 159 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 Q56UQ5 140 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 PRNTQ86SH4 94 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 BPIFA4PQ86YQ2 179 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 ZFAND2AQ8N6M9 145 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 WFDC11Q8NEX6 87 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 OR4B1Q8NGF8 309 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 OR10D4PQ8NGN7 298 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 DCANP1Q8TF63 244 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 TSKUQ8WUA8 353 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 BTF3L4Q96K17 158 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 PACRGQ96M98 296 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 GNB1LQ9BYB4 327 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 PEF1Q9UBV8 284 aaKnown RBP1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 RABAC1Q9UI14 185 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 VPREB3Q9UKI3 123 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 PRELID1Q9Y255 219 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 MYO18BQ8IUG5 2567 aa1.65□□□□□ -2.15
HMGB1P11-201ENST00000413899 CELSR2Q9HCU4 2923 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 APCP25054 2843 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRBV7-1A0A0A6YYK4 115 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 RBAKDNA6NC62 111 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 A8MTW9 85 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 NDUFA4O00483 81 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 SPINK4O60575 86 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 MT-ND6P03923 174 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRGV3P03979 118 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 S100A9P06702 114 aaKnown RBP1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 LGALS1P09382 135 aaKnown RBP1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 FABP4P15090 132 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 RPL7P18124 248 aaKnown RBP1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 PMCHP20382 165 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 S100PP25815 95 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 SRIP30626 198 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 UBE2G1P62253 170 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 PAFAH1B2P68402 229 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 C1orf194Q5T5A4 169 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 RASL11AQ6T310 242 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 AMTNQ6UX39 209 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 ATP5L2Q7Z4Y8 100 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 BAGE2Q86Y30 109 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 ORAOV1Q8WV07 137 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 SLC50A1Q9BRV3 221 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 AGPAT4-IT1Q9H0P7 198 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 TP73-AS1Q9UF72 201 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 NAT8BQ9UHF3 227 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 TRAPPC1Q9Y5R8 145 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 U3KQK5 164 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 TACC2O95359 2948 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 POLQO75417 2590 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 ZANQ9Y493 2812 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 PTPN13Q12923 2485 aa1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 SPTAN1Q13813 2472 aaKnown RBP1.64□□□□□ -2.15
HMGB1P11-201ENST00000413899 VPS13CQ709C8 3753 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 ZNF469Q96JG9 3925 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 IGHV1-24A0A0C4DH33 117 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 LINC01546A6NGU7 62 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 C2orf70A6NJV1 201 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 M0QZK8 103 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 NPYP01303 97 aa1.63□□□□□ -2.15
HMGB1P11-201ENST00000413899 S100A6P06703 90 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms