RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 RNASE13Q5GAN3 156 aaKnown RBP13.88□□□□□ -0.19
TNFRSF8-202ENST00000413146 RBMY1BA6NDE4 496 aaKnown RBP13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 RBMY1EA6NEQ0 496 aaKnown RBP13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 A8MTW9 85 aa13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 C9JAW5 83 aa13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 SLC25A20O43772 301 aa13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 RBMY1DP0C7P1 496 aaKnown RBP13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 TRAV8-3A0A0A6YYJ7 113 aa13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 PRM2P04554 102 aa13.87□□□□□ -0.19
TNFRSF8-202ENST00000413146 NACAE9PAV3 2078 aa13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 IGHV1-58A0A0C4DH39 117 aa13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 C18orf65Q6ZTR6 163 aa13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 SPANXA1Q9NS26 97 aa13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 BEX4Q9NWD9 120 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 PIK3CD-AS1Q5SR53 167 aa13.86□□□□□ -0.19
TNFRSF8-202ENST00000413146 PRRC2AP48634 2157 aaKnown RBP13.85□□□□□ -0.19
TNFRSF8-202ENST00000413146 SPINK8P0C7L1 97 aa13.85□□□□□ -0.19
TNFRSF8-202ENST00000413146 LITAFQ99732 161 aa13.85□□□□□ -0.19
TNFRSF8-202ENST00000413146 CHCHD7Q9BUK0 85 aa13.85□□□□□ -0.19
TNFRSF8-202ENST00000413146 TINCRA0A1B0GVN0 87 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 Q6ZSN1 163 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 Q6ZUT4 128 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 TMEM61Q8N0U2 210 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 PEMTQ9UBM1 199 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 Q9UF83 564 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 NDUFA12Q9UI09 145 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 UBE2D4Q9Y2X8 147 aa13.84□□□□□ -0.19
TNFRSF8-202ENST00000413146 M0QXV9 152 aa13.83□□□□□ -0.19
TNFRSF8-202ENST00000413146 FSHBP01225 129 aa13.83□□□□□ -0.19
TNFRSF8-202ENST00000413146 PRSS2P07478 247 aa13.83□□□□□ -0.19
TNFRSF8-202ENST00000413146 CFAP46Q8IYW2 2715 aa13.83□□□□□ -0.2
TNFRSF8-202ENST00000413146 ATXN8Q156A1 80 aa13.83□□□□□ -0.2
TNFRSF8-202ENST00000413146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 IGKV2-29A2NJV5 120 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 MT-ATP8P03928 68 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 XGP55808 180 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 VSIG2Q96IQ7 327 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 LINC01587Q99440 93 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 CKS1BP61024 79 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 SPANXCQ9NY87 97 aa13.82□□□□□ -0.2
TNFRSF8-202ENST00000413146 MAP6D1Q9H9H5 199 aa13.81□□□□□ -0.2
TNFRSF8-202ENST00000413146 FLNCQ14315 2725 aa13.81□□□□□ -0.2
TNFRSF8-202ENST00000413146 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF8-202ENST00000413146 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
TNFRSF8-202ENST00000413146 TRBV30A0A0K0K1B3 111 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 KHDC1LQ5JSQ8 128 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 LINC00467Q9BRT7 94 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 GEMIN7Q9H840 131 aaKnown RBP13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 ANKRD17O75179 2603 aaKnown RBP13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 IGHV3-38A0A0C4DH36 116 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 IGHV3-53P01767 116 aa13.8□□□□□ -0.2
TNFRSF8-202ENST00000413146 CSMD2Q7Z408 3487 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 IGHV4-31P0DP07 118 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 MIAQ16674 131 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 LINC01620Q4KN68 170 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 ADAMTSL4-AS1Q5T5F5 129 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 C11orf72Q8NBR9 251 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 TRIAP1O43715 76 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 INSP01308 110 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
TNFRSF8-202ENST00000413146 A8MZ25 164 aa13.78□□□□□ -0.2
TNFRSF8-202ENST00000413146 C4orf3Q8WVX3 66 aa13.78□□□□□ -0.2
TNFRSF8-202ENST00000413146 ZFAND6Q6FIF0 208 aa13.77□□□□□ -0.21
TNFRSF8-202ENST00000413146 Q8N2B8 174 aa13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 ICOSQ9Y6W8 199 aa13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 UTP20O75691 2785 aaKnown RBP13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 NPC2P61916 151 aa13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 BEAN1Q3B7T3 259 aa13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
TNFRSF8-202ENST00000413146 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-202ENST00000413146 CR1P17927 2039 aa13.75□□□□□ -0.21
TNFRSF8-202ENST00000413146 USP9YO00507 2555 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF8-202ENST00000413146 ZANQ9Y493 2812 aa13.75□□□□□ -0.21
TNFRSF8-202ENST00000413146 RS1O15537 224 aa13.75□□□□□ -0.21
TNFRSF8-202ENST00000413146 DGAT2L7PQ6IED9 249 aa13.74□□□□□ -0.21
TNFRSF8-202ENST00000413146 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
TNFRSF8-202ENST00000413146 COX6CP09669 75 aa13.74□□□□□ -0.21
TNFRSF8-202ENST00000413146 DEFB114Q30KQ6 69 aa13.74□□□□□ -0.21
TNFRSF8-202ENST00000413146 CDKN2A-AS1Q9UH64 79 aa13.74□□□□□ -0.21
TNFRSF8-202ENST00000413146 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
TNFRSF8-202ENST00000413146 TIMM17BO60830 172 aa13.73□□□□□ -0.21
TNFRSF8-202ENST00000413146 TIRAPP58753 221 aa13.72□□□□□ -0.21
TNFRSF8-202ENST00000413146 RNF183Q96D59 192 aa13.72□□□□□ -0.21
TNFRSF8-202ENST00000413146 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
TNFRSF8-202ENST00000413146 NDUFA1O15239 70 aa13.71□□□□□ -0.21
TNFRSF8-202ENST00000413146 IFITM1P13164 125 aa13.71□□□□□ -0.21
TNFRSF8-202ENST00000413146 XCL2Q9UBD3 114 aa13.71□□□□□ -0.21
TNFRSF8-202ENST00000413146 IGLV5-45A0A087WSX0 123 aa13.71□□□□□ -0.22
TNFRSF8-202ENST00000413146 EPG5Q9HCE0 2579 aa13.71□□□□□ -0.22
TNFRSF8-202ENST00000413146 MXRA5Q9NR99 2828 aa13.7□□□□□ -0.22
TNFRSF8-202ENST00000413146 Q6ZSV7 163 aa13.7□□□□□ -0.22
TNFRSF8-202ENST00000413146 TMEM101Q96IK0 257 aa13.7□□□□□ -0.22
TNFRSF8-202ENST00000413146 RPL13AP40429 203 aaKnown RBP13.69□□□□□ -0.22
TNFRSF8-202ENST00000413146 ZNF462Q96JM2 2506 aa13.69□□□□□ -0.22
TNFRSF8-202ENST00000413146 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
TNFRSF8-202ENST00000413146 CIRBPQ14011 172 aaKnown RBP13.68□□□□□ -0.22
TNFRSF8-202ENST00000413146 HIST2H2BDQ6DRA6 164 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms