RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 PSMB8P28062 276 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 SPATA12Q7Z6I5 190 aa8.42□□□□□ -1.06
PTPRF-204ENST00000412568 USP34Q70CQ2 3546 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 CLPSL1A2RUU4 121 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 RS1O15537 224 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 C4orf3Q8WVX3 66 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 IFITM1P13164 125 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 C15orf53Q8NAA6 179 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 OPRPNQ99935 248 aaPredicted RBP8.41□□□□□ -1.06
PTPRF-204ENST00000412568 C11orf21Q9P2W6 132 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
PTPRF-204ENST00000412568 DEFB135Q30KP9 77 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 ZNF702PQ9H963 129 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
PTPRF-204ENST00000412568 K7EQG2 157 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 PRR9Q5T870 116 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 PIFOQ8TCI5 191 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 MAST4O15021 2626 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 WFDC10AQ9H1F0 79 aa8.4□□□□□ -1.06
PTPRF-204ENST00000412568 GAS8-AS1O95177 125 aa8.4□□□□□ -1.07
PTPRF-204ENST00000412568 PLA2G2AP14555 144 aa8.4□□□□□ -1.07
PTPRF-204ENST00000412568 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.07
PTPRF-204ENST00000412568 COL12A1Q99715 3063 aa8.4□□□□□ -1.07
PTPRF-204ENST00000412568 PFN2P35080 140 aa8.4□□□□□ -1.07
PTPRF-204ENST00000412568 TEP1Q99973 2627 aaKnown RBP8.39□□□□□ -1.07
PTPRF-204ENST00000412568 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 ODF1Q14990 250 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
PTPRF-204ENST00000412568 S100A7L2Q5SY68 101 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 ZFP2Q6ZN57 461 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 LEPROTO15243 131 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 CITED1Q99966 193 aa8.39□□□□□ -1.07
PTPRF-204ENST00000412568 CFC1BP0CG36 223 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 CFC1P0CG37 223 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 DEFB114Q30KQ6 69 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 PTH2Q96A98 100 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 LY6G6DO95868 133 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 LINC01006Q8NI28 216 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 TMEM89A2RUT3 159 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 CRLF1O75462 422 aa8.38□□□□□ -1.07
PTPRF-204ENST00000412568 G3V4G9 280 aa8.37□□□□□ -1.07
PTPRF-204ENST00000412568 RBX1P62877 108 aa8.37□□□□□ -1.07
PTPRF-204ENST00000412568 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
PTPRF-204ENST00000412568 MRPS12O15235 138 aaKnown RBP8.37□□□□□ -1.07
PTPRF-204ENST00000412568 NXPH4O95158 308 aa8.37□□□□□ -1.07
PTPRF-204ENST00000412568 APOC4P55056 127 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 PROK1P58294 105 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 LINC00482Q8N8I6 264 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 IGLV1-40P01703 118 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 ANGP03950 147 aaKnown RBP8.36□□□□□ -1.07
PTPRF-204ENST00000412568 A4D1N5 150 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 Q6ZTI0 123 aa8.36□□□□□ -1.07
PTPRF-204ENST00000412568 IGLV10-54A0A075B6I4 117 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 FLNCQ14315 2725 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 XCL1P47992 114 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 GYPEP15421 78 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
PTPRF-204ENST00000412568 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
PTPRF-204ENST00000412568 C9orf66Q5T8R8 295 aa8.34□□□□□ -1.07
PTPRF-204ENST00000412568 CRYBA4P53673 196 aa8.34□□□□□ -1.07
PTPRF-204ENST00000412568 BAALCQ8WXS3 180 aa8.34□□□□□ -1.07
PTPRF-204ENST00000412568 SS18Q15532 418 aa8.34□□□□□ -1.07
PTPRF-204ENST00000412568 RHOHQ15669 191 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 FOXI1Q12951 378 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 Q8N976 141 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
PTPRF-204ENST00000412568 C11orf86A6NJI1 115 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 IGSF10Q6WRI0 2623 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 LGALS9O00182 355 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 SOCS3O14543 225 aa8.32□□□□□ -1.08
PTPRF-204ENST00000412568 TACC2O95359 2948 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 UBE2DNLQ8IWF7 75 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 MUSTN1Q8IVN3 82 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 DAND5Q8N907 189 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 SPANXA1Q9NS26 97 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 U3KQK5 164 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
PTPRF-204ENST00000412568 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
PTPRF-204ENST00000412568 DNAJC30Q96LL9 226 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms