RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PYGO1Q9Y3Y4 419 aa17.64■□□□□ 0.41
VRK2-202ENST00000412104 CSNK1G2-AS1Q8NCQ2 148 aa17.63■□□□□ 0.41
VRK2-202ENST00000412104 C16orf74Q96GX8 76 aa17.63■□□□□ 0.41
VRK2-202ENST00000412104 ZNF479Q96JC4 524 aa17.63■□□□□ 0.41
VRK2-202ENST00000412104 CHCHD7Q9BUK0 85 aa17.63■□□□□ 0.41
VRK2-202ENST00000412104 HERVK_113P61574 105 aa17.62■□□□□ 0.41
VRK2-202ENST00000412104 NSD1Q96L73 2696 aaPredicted RBP17.62■□□□□ 0.41
VRK2-202ENST00000412104 PLAC8L1A1L4L8 177 aa17.62■□□□□ 0.41
VRK2-202ENST00000412104 FXYD2P54710 66 aa17.62■□□□□ 0.41
VRK2-202ENST00000412104 TMEM170BQ5T4T1 132 aa17.62■□□□□ 0.41
VRK2-202ENST00000412104 NFE4Q86UQ8 179 aa17.62■□□□□ 0.41
VRK2-202ENST00000412104 NOP10Q9NPE3 64 aaKnown RBP17.62■□□□□ 0.41
VRK2-202ENST00000412104 IGHV3-38A0A0C4DH36 116 aa17.61■□□□□ 0.41
VRK2-202ENST00000412104 H3BRM9 83 aa17.61■□□□□ 0.41
VRK2-202ENST00000412104 DAZ2Q13117 558 aaKnown RBP17.61■□□□□ 0.41
VRK2-202ENST00000412104 VAMP3Q15836 100 aa17.61■□□□□ 0.41
VRK2-202ENST00000412104 PHLDA1Q8WV24 401 aaPredicted RBP17.61■□□□□ 0.41
VRK2-202ENST00000412104 TRAV4A0A0B4J268 109 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 FOSL1P15407 271 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 UBE2V1Q13404 147 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 CEND1Q8N111 149 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 VCX2Q9H322 139 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 FN1P02751 2386 aaKnown RBP17.6■□□□□ 0.41
VRK2-202ENST00000412104 FAM104AQ969W3 186 aa17.6■□□□□ 0.41
VRK2-202ENST00000412104 K7EP13 123 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 CCL25O15444 150 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 COTL1Q14019 142 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 C2CD3Q4AC94 2353 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 ZNF815PA8K554 130 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 PTTG1IPP53801 180 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 TAL2Q16559 108 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 CEMP1Q6PRD7 247 aaPredicted RBP17.59■□□□□ 0.41
VRK2-202ENST00000412104 TM2D2Q9BX73 214 aa17.59■□□□□ 0.41
VRK2-202ENST00000412104 CRLF1O75462 422 aa17.58■□□□□ 0.4
VRK2-202ENST00000412104 AMELXQ99217 191 aa17.58■□□□□ 0.4
VRK2-202ENST00000412104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.57■□□□□ 0.4
VRK2-202ENST00000412104 IGKV2-29A2NJV5 120 aaPredicted RBP17.57■□□□□ 0.4
VRK2-202ENST00000412104 K7EQD1 137 aa17.57■□□□□ 0.4
VRK2-202ENST00000412104 RRN3P1Q2M238 152 aa17.57■□□□□ 0.4
VRK2-202ENST00000412104 SPANXA1Q9NS26 97 aa17.57■□□□□ 0.4
VRK2-202ENST00000412104 UBE2D4Q9Y2X8 147 aa17.57■□□□□ 0.4
VRK2-202ENST00000412104 SPATA3Q8NHX4 192 aa17.56■□□□□ 0.4
VRK2-202ENST00000412104 TRBV7-3A0A075B6L6 115 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 C9orf118A6NHY6 69 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 CRYBA4P53673 196 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 HIST1H4GQ99525 98 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 A0A0J9YXV3 536 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 TRBV10-1A0A0K0K1A3 114 aa17.55■□□□□ 0.4
VRK2-202ENST00000412104 ZNF22P17026 224 aaPredicted RBP17.54■□□□□ 0.4
VRK2-202ENST00000412104 INSL3P51460 131 aa17.54■□□□□ 0.4
VRK2-202ENST00000412104 TSPEAR-AS2P59090 65 aa17.54■□□□□ 0.4
VRK2-202ENST00000412104 AMMECR1LQ6DCA0 310 aa17.54■□□□□ 0.4
VRK2-202ENST00000412104 RAB37Q96AX2 223 aa17.54■□□□□ 0.4
VRK2-202ENST00000412104 PLEKHB2Q96CS7 222 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 OVOL2Q9BRP0 275 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 HIVEP1P15822 2718 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 TMEM223A0PJW6 202 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 GAGE12BA1L429 117 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 GAGE7O76087 117 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 GAGE12FP0CL80 117 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 GAGE12GP0CL81 117 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 GAGE12IP0CL82 117 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 RPL36AP83881 106 aaKnown RBP17.53■□□□□ 0.4
VRK2-202ENST00000412104 SLC25A29Q8N8R3 303 aa17.53■□□□□ 0.4
VRK2-202ENST00000412104 RPL36ALQ969Q0 106 aaKnown RBP17.53■□□□□ 0.4
VRK2-202ENST00000412104 SMIM13P0DJ93 91 aa17.52■□□□□ 0.4
VRK2-202ENST00000412104 RNASE13Q5GAN3 156 aaKnown RBP17.52■□□□□ 0.4
VRK2-202ENST00000412104 C9orf66Q5T8R8 295 aa17.52■□□□□ 0.4
VRK2-202ENST00000412104 SCGB1D4Q6XE38 83 aa17.52■□□□□ 0.4
VRK2-202ENST00000412104 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.52■□□□□ 0.4
VRK2-202ENST00000412104 TRGV2A0A075B6R0 118 aa17.51■□□□□ 0.39
VRK2-202ENST00000412104 NOTCH3Q9UM47 2321 aa17.51■□□□□ 0.39
VRK2-202ENST00000412104 H3BUT2 72 aa17.51■□□□□ 0.39
VRK2-202ENST00000412104 NHP2Q9NX24 153 aaKnown RBP17.51■□□□□ 0.39
VRK2-202ENST00000412104 K7ERJ3 54 aa17.5■□□□□ 0.39
VRK2-202ENST00000412104 MRPS36P82909 103 aaKnown RBP17.5■□□□□ 0.39
VRK2-202ENST00000412104 J3QQQ9 107 aa17.49■□□□□ 0.39
VRK2-202ENST00000412104 Q6ZUT4 128 aa17.49■□□□□ 0.39
VRK2-202ENST00000412104 CITED1Q99966 193 aa17.49■□□□□ 0.39
VRK2-202ENST00000412104 NAA38Q9BRA0 125 aaKnown RBP17.49■□□□□ 0.39
VRK2-202ENST00000412104 LEPROTO15243 131 aa17.48■□□□□ 0.39
VRK2-202ENST00000412104 UBE2D3P61077 147 aa17.48■□□□□ 0.39
VRK2-202ENST00000412104 UBE2D2P62837 147 aa17.48■□□□□ 0.39
VRK2-202ENST00000412104 DAZ4Q86SG3 579 aaKnown RBP17.48■□□□□ 0.39
VRK2-202ENST00000412104 DAZ3Q9NR90 486 aaKnown RBP17.48■□□□□ 0.39
VRK2-202ENST00000412104 GAGE12JA6NER3 117 aa17.47■□□□□ 0.39
VRK2-202ENST00000412104 LGALS3P17931 250 aaKnown RBP17.47■□□□□ 0.39
VRK2-202ENST00000412104 GAGE4Q13068 117 aa17.47■□□□□ 0.39
VRK2-202ENST00000412104 GAGE5Q13069 117 aa17.47■□□□□ 0.39
VRK2-202ENST00000412104 GAGE13Q4V321 117 aa17.47■□□□□ 0.39
VRK2-202ENST00000412104 CIDEAO60543 219 aa17.45■□□□□ 0.38
VRK2-202ENST00000412104 TIMM21Q9BVV7 248 aa17.45■□□□□ 0.38
VRK2-202ENST00000412104 IGHV3-64A0A075B6Q5 118 aa17.45■□□□□ 0.38
VRK2-202ENST00000412104 A0A0J9YY99 117 aa17.45■□□□□ 0.38
VRK2-202ENST00000412104 NTM-AS1Q6ZSK4 140 aa17.44■□□□□ 0.38
VRK2-202ENST00000412104 TINCRA0A1B0GVN0 87 aa17.43■□□□□ 0.38
VRK2-202ENST00000412104 TRBV6-4A0A1B0GX49 114 aa17.43■□□□□ 0.38
VRK2-202ENST00000412104 A0A1W2PPM0 123 aa17.42■□□□□ 0.38
VRK2-202ENST00000412104 C12orf74Q32Q52 190 aa17.42■□□□□ 0.38
VRK2-202ENST00000412104 TRGV4A0A0C4DH28 118 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms