RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RNF17Q9BXT8 1623 aaKnown RBP2□□□□□ -2.09
BRCA1-204ENST00000412061 LRRIQ1Q96JM4 1722 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 MYO5CQ9NQX4 1742 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 NSD3Q9BZ95 1437 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 ATP7BP35670 1465 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 HMGXB3Q12766 1538 aa2□□□□□ -2.09
BRCA1-204ENST00000412061 NESP48681 1621 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 TARBP1Q13395 1621 aaKnown RBP1.99□□□□□ -2.09
BRCA1-204ENST00000412061 ADCY10Q96PN6 1610 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 IQGAP1P46940 1657 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 TOPAZ1Q8N9V7 1692 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 H3BQ15 152 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 LINC00032P0C843 101 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 UBE2D1P51668 147 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 VAMP8Q9BV40 100 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 LINC00474Q9P2X8 69 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 NRXN2Q9P2S2 1712 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 SPAG17Q6Q759 2223 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 COL5A1P20908 1838 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-204ENST00000412061 PARP14Q460N5 1801 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 DOCK2Q92608 1830 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 ATP10BO94823 1461 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 DUOX2Q9NRD8 1548 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 ARHGEF5Q12774 1597 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 ABCA9Q8IUA7 1624 aa1.99□□□□□ -2.09
BRCA1-204ENST00000412061 MYOM1P52179 1685 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 KIAA1551Q9HCM1 1747 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 IGKV2-29A2NJV5 120 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-204ENST00000412061 SIX6O95475 246 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 FXYD4P59646 89 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 UNQ6190/PRO20217Q6UXQ8 127 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 ZNF818PQ6ZRF7 136 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 MYOZ3Q8TDC0 251 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 V9GYS6 101 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 ATP7AQ04656 1500 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 LRRC7Q96NW7 1537 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 CDC42BPGQ6DT37 1551 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 SAMD9LQ8IVG5 1584 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 ABCA6Q8N139 1617 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 KDM5AP29375 1690 aaKnown RBP1.98□□□□□ -2.09
BRCA1-204ENST00000412061 KNDC1Q76NI1 1749 aa1.98□□□□□ -2.09
BRCA1-204ENST00000412061 AFDNP55196 1824 aaKnown RBP1.98□□□□□ -2.09
BRCA1-204ENST00000412061 TEX49A0A1B0GTD5 131 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 GNGT2O14610 69 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 C9orf62Q8N4C0 152 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 LINC00312Q9Y6C7 94 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 ABCC6O95255 1503 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 GLI2P10070 1586 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 TET3O43151 1660 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 SPTBP11277 2137 aa1.97□□□□□ -2.09
BRCA1-204ENST00000412061 NBDYA0A0U1RRE5 68 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 CHD1O14646 1710 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 UNC13BO14795 1591 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 FXYD3Q14802 87 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 IQGAP3Q86VI3 1631 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 C20orf197Q8N268 126 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 MYO3AQ8NEV4 1616 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 ZCCHC13Q8WW36 166 aaKnown RBP1.96□□□□□ -2.1
BRCA1-204ENST00000412061 MADDQ8WXG6 1647 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 TSLPQ969D9 159 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 CYP4F30PQ9H0H9 118 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 PLXNA1Q9UIW2 1896 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 MAST1Q9Y2H9 1570 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 ARFGEF1Q9Y6D6 1849 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 SETBP1Q9Y6X0 1596 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 ABCA4P78363 2273 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 SDK1Q7Z5N4 2213 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 TANC1Q9C0D5 1861 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 CROCC2H7BZ55 1655 aa1.96□□□□□ -2.1
BRCA1-204ENST00000412061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.95□□□□□ -2.1
BRCA1-204ENST00000412061 MLH3Q9UHC1 1453 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 A0A0D9SFI3 127 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 C10orf128Q5T292 105 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 CRYBG1Q9Y4K1 1723 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 INO80Q9ULG1 1556 aaPredicted RBP1.95□□□□□ -2.1
BRCA1-204ENST00000412061 TRPM2O94759 1503 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 NFAT5O94916 1531 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 AGLP35573 1532 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 SYCP2Q9BX26 1530 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 C1orf167Q5SNV9 1468 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 MAGI1Q96QZ7 1491 aaPredicted RBP1.95□□□□□ -2.1
BRCA1-204ENST00000412061 CD163L1Q9NR16 1453 aa1.95□□□□□ -2.1
BRCA1-204ENST00000412061 DLG5Q8TDM6 1919 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 TRBV7-1A0A0A6YYK4 115 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 hADV29S1A0JD25 119 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 SSBP1Q04837 148 aaKnown RBP1.94□□□□□ -2.1
BRCA1-204ENST00000412061 XAF1Q6GPH4 301 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 DEFB132Q7Z7B7 95 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 FAM213BQ8TBF2 198 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 PMCHL2Q9BQD1 86 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 PSME4Q14997 1843 aa1.94□□□□□ -2.1
BRCA1-204ENST00000412061 PRRC2BQ5JSZ5 2229 aaKnown RBP1.94□□□□□ -2.1
BRCA1-204ENST00000412061 MED12Q93074 2177 aa1.93□□□□□ -2.1
BRCA1-204ENST00000412061 A0A087WXM4 84 aa1.93□□□□□ -2.1
BRCA1-204ENST00000412061 NAP1L6A6NFF2 107 aa1.93□□□□□ -2.1
BRCA1-204ENST00000412061 CCL3L1P16619 93 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms