RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 LRRC37A2A6NM11 1700 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 GAPVD1Q14C86 1478 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 ZFHX3Q15911 3703 aa-1.33□□□□□ -2.62
RNU4-55P-201ENST00000410731 NCR2O95944 276 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 HIST1H1BP16401 226 aaKnown RBP-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 SMIM4Q8WVI0 70 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 LAMTOR2Q9Y2Q5 125 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 NOP16Q9Y3C1 178 aaKnown RBP-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 MTORP42345 2549 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 MUC22E2RYF6 1773 aaPredicted RBP-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 CEP290O15078 2479 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 MED23Q9ULK4 1368 aa-1.34□□□□□ -2.62
RNU4-55P-201ENST00000410731 UHRF1BP1LA0JNW5 1464 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 A2MP01023 1474 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 TCRAP04437 139 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 RPL22P35268 128 aaKnown RBP-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 UBE2D1P51668 147 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 MRPS25P82663 173 aaKnown RBP-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 ATP6V0E2Q8NHE4 81 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 DYDC1Q8WWB3 177 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 A0A0C4DFX4 3053 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 ADGRB1O14514 1584 aa-1.35□□□□□ -2.63
RNU4-55P-201ENST00000410731 J3QLW9 94 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 UTP20O75691 2785 aaKnown RBP-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 CCL18P55774 89 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 C9orf116Q5BN46 136 aaPredicted RBP-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 Q6JHZ5 121 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 HRCT1Q6UXD1 115 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 FAM24BQ8N5W8 94 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 C10orf82Q8WW14 230 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 APLNQ9ULZ1 77 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 DNAH8Q96JB1 4490 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 MYH8P13535 1937 aa-1.36□□□□□ -2.63
RNU4-55P-201ENST00000410731 LRRC37A3O60309 1634 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 KDM5CP41229 1560 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 TRANK1O15050 2925 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 ZNF236Q9UL36 1845 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 BORCS7-ASMTA0A0B4J1R7 106 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 SYS1-DBNDD2H3BUS1 97 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 PITX3O75364 302 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 GNG3P63215 75 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 PSPHP78330 225 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 C9orf62Q8N4C0 152 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 MED31Q9Y3C7 131 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 NBEAQ8NFP9 2946 aa-1.37□□□□□ -2.63
RNU4-55P-201ENST00000410731 PDE4DIPQ5VU43 2346 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 M0R135 149 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 IFNGP01579 166 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 RBP4P02753 201 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 PIRTP0C851 137 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 COX8AP10176 69 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 ATP11AUNQ6ZP68 121 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 SMIM20Q8N5G0 67 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 RPRMQ9NS64 109 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 NDUFA12Q9UI09 145 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 DNAJC15Q9Y5T4 150 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 PRDM2Q13029 1718 aa-1.38□□□□□ -2.63
RNU4-55P-201ENST00000410731 CTXND1A0A1B0GTU2 59 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 DEFA5Q01523 94 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 TMEM170BQ5T4T1 132 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 LINC01545Q5VT33 79 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 TMED4Q7Z7H5 227 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 TRAPPC2LQ9UL33 140 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 R4GMQ9 66 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 SBF2Q86WG5 1849 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 MRC1P22897 1456 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 GCN1Q92616 2671 aaKnown RBP-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 ADAMTS12P58397 1594 aa-1.39□□□□□ -2.63
RNU4-55P-201ENST00000410731 YTHDC2Q9H6S0 1430 aaKnown RBP-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 H0YGG7 62 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 FAM107AO95990 144 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 IFNA17P01571 189 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 COX17Q14061 63 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 DCUN1D2Q6PH85 259 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 ZNF818PQ6ZRF7 136 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 CCDC32Q9BV29 185 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 POLA1P09884 1462 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 COL4A6Q14031 1691 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 CELSR3Q9NYQ7 3312 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 KIAA0556O60303 1618 aa-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 TROQ12816 1431 aaPredicted RBP-1.4□□□□□ -2.63
RNU4-55P-201ENST00000410731 CPSF4LA6NMK7 179 aaKnown RBP-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 E7EQ34 232 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 H3BNG1 76 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 YPEL1O60688 119 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 PPP1R17O96001 155 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 HLA-DRB4P13762 266 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 RPL7P18124 248 aaKnown RBP-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 POLR2HP52434 150 aaKnown RBP-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 TCTAP57738 103 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 CLLU1Q5K131 121 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 SPANXN1Q5VSR9 72 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 RPL7L1Q6DKI1 246 aaKnown RBP-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 NAA60Q9H7X0 242 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 STOML2Q9UJZ1 356 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 LINC00312Q9Y6C7 94 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 HLA-DRB4X5D2U9 266 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 PTPN23Q9H3S7 1636 aa-1.41□□□□□ -2.64
RNU4-55P-201ENST00000410731 SLIT1O75093 1534 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms