RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
MINDY4-202ENST00000409881 VCX2Q9H322 139 aa10.57□□□□□ -0.72
MINDY4-202ENST00000409881 TRAV8-2A0A0B4J237 113 aa10.56□□□□□ -0.72
MINDY4-202ENST00000409881 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
MINDY4-202ENST00000409881 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-202ENST00000409881 PRR9Q5T870 116 aa10.56□□□□□ -0.72
MINDY4-202ENST00000409881 C14orf178Q8N769 122 aaPredicted RBP10.56□□□□□ -0.72
MINDY4-202ENST00000409881 TRBV20-1A0A075B6N2 111 aa10.56□□□□□ -0.72
MINDY4-202ENST00000409881 MGPP08493 103 aa10.56□□□□□ -0.72
MINDY4-202ENST00000409881 DUSP14O95147 198 aaKnown RBP10.55□□□□□ -0.72
MINDY4-202ENST00000409881 CRYGDP07320 174 aa10.55□□□□□ -0.72
MINDY4-202ENST00000409881 VWFP04275 2813 aa10.55□□□□□ -0.72
MINDY4-202ENST00000409881 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
MINDY4-202ENST00000409881 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
MINDY4-202ENST00000409881 IGHV3-30P01768 117 aa10.54□□□□□ -0.72
MINDY4-202ENST00000409881 IGHV3-30-5P0DP03 117 aa10.54□□□□□ -0.72
MINDY4-202ENST00000409881 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
MINDY4-202ENST00000409881 TRPT1Q86TN4 253 aaKnown RBP10.54□□□□□ -0.72
MINDY4-202ENST00000409881 C9JAW5 83 aa10.53□□□□□ -0.72
MINDY4-202ENST00000409881 SLC25A20O43772 301 aa10.53□□□□□ -0.72
MINDY4-202ENST00000409881 DEFB114Q30KQ6 69 aa10.53□□□□□ -0.72
MINDY4-202ENST00000409881 IGLV4-69A0A075B6H9 119 aa10.53□□□□□ -0.72
MINDY4-202ENST00000409881 TMEM61Q8N0U2 210 aa10.52□□□□□ -0.72
MINDY4-202ENST00000409881 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.72
MINDY4-202ENST00000409881 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
MINDY4-202ENST00000409881 H7C2G1 150 aa10.52□□□□□ -0.73
MINDY4-202ENST00000409881 TSHBP01222 138 aa10.52□□□□□ -0.73
MINDY4-202ENST00000409881 DPH3P1Q9H4G8 78 aa10.52□□□□□ -0.73
MINDY4-202ENST00000409881 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
MINDY4-202ENST00000409881 HERVK_113P61574 105 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 WFDC9Q8NEX5 89 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 TRRAPQ9Y4A5 3859 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 RHODO00212 210 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 C9orf66Q5T8R8 295 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 NOTCH3Q9UM47 2321 aa10.51□□□□□ -0.73
MINDY4-202ENST00000409881 CCDC179H3BU77 68 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 SNCGO76070 127 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
MINDY4-202ENST00000409881 TMEM170BQ5T4T1 132 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 TP53TG1Q9Y2A0 90 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 IGLV1-51P01701 117 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
MINDY4-202ENST00000409881 C16orf92Q96LL3 132 aa10.49□□□□□ -0.73
MINDY4-202ENST00000409881 ANK2Q01484 3957 aa10.49□□□□□ -0.73
MINDY4-202ENST00000409881 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-202ENST00000409881 DEFB1P60022 68 aa10.49□□□□□ -0.73
MINDY4-202ENST00000409881 RPL39P62891 51 aaKnown RBP10.49□□□□□ -0.73
MINDY4-202ENST00000409881 NTN5Q8WTR8 489 aaPredicted RBP10.49□□□□□ -0.73
MINDY4-202ENST00000409881 A4D1N5 150 aa10.48□□□□□ -0.73
MINDY4-202ENST00000409881 KRTAP21-3Q3LHN1 58 aa10.48□□□□□ -0.73
MINDY4-202ENST00000409881 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
MINDY4-202ENST00000409881 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
MINDY4-202ENST00000409881 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
MINDY4-202ENST00000409881 SOCS3O14543 225 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 PMVKQ15126 192 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 Q8N1Y9 231 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE7O76087 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 ASIPP42127 132 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 GAGE4Q13068 117 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 MRPL53Q96EL3 112 aaKnown RBP10.47□□□□□ -0.73
MINDY4-202ENST00000409881 AMELXQ99217 191 aa10.47□□□□□ -0.73
MINDY4-202ENST00000409881 K7EQG2 157 aa10.46□□□□□ -0.73
MINDY4-202ENST00000409881 GNRH2O43555 120 aa10.46□□□□□ -0.73
MINDY4-202ENST00000409881 IGHV3-33P01772 117 aa10.46□□□□□ -0.73
MINDY4-202ENST00000409881 PAPPA-AS1Q5QFB9 102 aa10.46□□□□□ -0.73
MINDY4-202ENST00000409881 J3QQQ9 107 aa10.46□□□□□ -0.74
MINDY4-202ENST00000409881 ID1P41134 155 aa10.46□□□□□ -0.74
MINDY4-202ENST00000409881 ZFAND2AQ8N6M9 145 aa10.46□□□□□ -0.74
MINDY4-202ENST00000409881 TRAV2A0A0B4J234 112 aa10.45□□□□□ -0.74
MINDY4-202ENST00000409881 IFITM1P13164 125 aa10.45□□□□□ -0.74
MINDY4-202ENST00000409881 LGALS3P17931 250 aaKnown RBP10.45□□□□□ -0.74
MINDY4-202ENST00000409881 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
MINDY4-202ENST00000409881 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
MINDY4-202ENST00000409881 TEX49A0A1B0GTD5 131 aa10.45□□□□□ -0.74
MINDY4-202ENST00000409881 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
MINDY4-202ENST00000409881 IGHV3-64A0A075B6Q5 118 aa10.44□□□□□ -0.74
MINDY4-202ENST00000409881 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
MINDY4-202ENST00000409881 SNRPD3P62318 126 aaKnown RBP10.44□□□□□ -0.74
MINDY4-202ENST00000409881 Q1RN00 199 aa10.44□□□□□ -0.74
MINDY4-202ENST00000409881 SMIM20Q8N5G0 67 aa10.44□□□□□ -0.74
MINDY4-202ENST00000409881 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
MINDY4-202ENST00000409881 HERV-K104P63124 156 aa10.44□□□□□ -0.74
MINDY4-202ENST00000409881 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
MINDY4-202ENST00000409881 MUSTN1Q8IVN3 82 aa10.43□□□□□ -0.74
MINDY4-202ENST00000409881 ODF3Q96PU9 254 aa10.43□□□□□ -0.74
MINDY4-202ENST00000409881 JPT2Q9H910 190 aa10.43□□□□□ -0.74
MINDY4-202ENST00000409881 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
MINDY4-202ENST00000409881 LINC01620Q4KN68 170 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms