RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 RNF152Q8N8N0 203 aa11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 PRO1854Q9UHT4 67 aa11.13□□□□□ -0.63
LYSMD4-204ENST00000409796 PROK1P58294 105 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 A4D1N5 150 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 EIF4EBP3O60516 100 aaPredicted RBP11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 DSCR9P59020 149 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 SHISA2Q6UWI4 295 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 NACAE9PAV3 2078 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
LYSMD4-204ENST00000409796 UTP20O75691 2785 aaKnown RBP11.11□□□□□ -0.63
LYSMD4-204ENST00000409796 PRM2P04554 102 aa11.11□□□□□ -0.63
LYSMD4-204ENST00000409796 ELANEP08246 267 aa11.11□□□□□ -0.63
LYSMD4-204ENST00000409796 ZNF702PQ9H963 129 aa11.11□□□□□ -0.63
LYSMD4-204ENST00000409796 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
LYSMD4-204ENST00000409796 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 A0A096LNT2 108 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 TMEM262E9PQX1 116 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 SCGB1C2P0DMR2 95 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 FAM104AQ969W3 186 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 UBE2E2Q96LR5 201 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 DEFB131AP59861 70 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 MUSTN1Q8IVN3 82 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
LYSMD4-204ENST00000409796 ZANQ9Y493 2812 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 CCDC179H3BU77 68 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 CD28P10747 220 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 SLURP1P55000 103 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 CRLF1O75462 422 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 NDUFV3P56181 108 aaKnown RBP11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 DEFB136Q30KP8 78 aa11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 TMEM263Q8WUH6 116 aaKnown RBP11.09□□□□□ -0.63
LYSMD4-204ENST00000409796 ANKRD17O75179 2603 aaKnown RBP11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 IGHV3-33P01772 117 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 RBMY1DP0C7P1 496 aaKnown RBP11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 SPXQ9BT56 116 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 EDA2RQ9HAV5 297 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 Q9UF83 564 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 J3QLI3 93 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 M0R2P5 195 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
LYSMD4-204ENST00000409796 IGHV3-30-3P0DP02 117 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 HERV-K104P63124 156 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 A0A0J9YXY3 114 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 SLC25A20O43772 301 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE2EQ4V326 116 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 Q6YL49 198 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 BEX4Q9NWD9 120 aaPredicted RBP11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE2DQ9UEU5 116 aa11.07□□□□□ -0.64
LYSMD4-204ENST00000409796 H3BMM0 161 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 H7C2G1 150 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 Q6ZSN1 163 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 TNFRSF18Q9Y5U5 241 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 LRRK2Q5S007 2527 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 A0A0B4J2C4 111 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE7O76087 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 GAGE4Q13068 117 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
LYSMD4-204ENST00000409796 TRAV8-3A0A0A6YYJ7 113 aa11.05□□□□□ -0.64
LYSMD4-204ENST00000409796 A8MTW9 85 aa11.05□□□□□ -0.64
LYSMD4-204ENST00000409796 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
LYSMD4-204ENST00000409796 C9JAW5 83 aa11.05□□□□□ -0.64
LYSMD4-204ENST00000409796 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
LYSMD4-204ENST00000409796 SNCGO76070 127 aa11.04□□□□□ -0.64
LYSMD4-204ENST00000409796 FSHBP01225 129 aa11.04□□□□□ -0.64
LYSMD4-204ENST00000409796 POLQO75417 2590 aa11.04□□□□□ -0.64
LYSMD4-204ENST00000409796 LITAFQ99732 161 aa11.03□□□□□ -0.64
LYSMD4-204ENST00000409796 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
LYSMD4-204ENST00000409796 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
LYSMD4-204ENST00000409796 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
LYSMD4-204ENST00000409796 CR1P17927 2039 aa11.03□□□□□ -0.64
LYSMD4-204ENST00000409796 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.64
LYSMD4-204ENST00000409796 ZNF415Q09FC8 603 aa11.02□□□□□ -0.64
LYSMD4-204ENST00000409796 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 IFITM1P13164 125 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 M0QXV9 152 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 Q1RN00 199 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 UBE2D4Q9Y2X8 147 aa11.02□□□□□ -0.65
LYSMD4-204ENST00000409796 A8MZ25 164 aa11.01□□□□□ -0.65
LYSMD4-204ENST00000409796 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms