RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 COX7BP24311 80 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 LGALS9BQ3B8N2 356 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 LGALS9CQ6DKI2 356 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 CUL9Q8IWT3 2517 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 C11orf52Q96A22 123 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 C3orf84H3BNL1 204 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 DLEU1O43261 78 aa6.4□□□□□ -1.38
SCN9A-203ENST00000409672 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.39
SCN9A-203ENST00000409672 ADCYAP1P18509 176 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 CT83Q5H943 113 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 C3orf22Q8N5N4 141 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 PROK1P58294 105 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 LINC00173Q6ZV60 143 aa6.4□□□□□ -1.39
SCN9A-203ENST00000409672 NUPR2A6NF83 97 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 LGALS9O00182 355 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 KIR2DL5BQ8NHK3 375 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 Q6ZS49 121 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 COL4A4P53420 1690 aaPredicted RBP6.39□□□□□ -1.39
SCN9A-203ENST00000409672 INSL3P51460 131 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 C1orf158Q8N1D5 194 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 SIVA1O15304 175 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 CHCHD10Q8WYQ3 142 aaPredicted RBP6.39□□□□□ -1.39
SCN9A-203ENST00000409672 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
SCN9A-203ENST00000409672 DAZAP2Q15038 168 aaPredicted RBP6.38□□□□□ -1.39
SCN9A-203ENST00000409672 BRI3O95415 125 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 BBC3Q96PG8 261 aaPredicted RBP6.38□□□□□ -1.39
SCN9A-203ENST00000409672 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 C22orf34Q6ZV56 151 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 F8W1H4 67 aa6.38□□□□□ -1.39
SCN9A-203ENST00000409672 TRBV10-1A0A0K0K1A3 114 aa6.37□□□□□ -1.39
SCN9A-203ENST00000409672 GDF5OSQ5U4N7 250 aa6.37□□□□□ -1.39
SCN9A-203ENST00000409672 Q6YL49 198 aa6.37□□□□□ -1.39
SCN9A-203ENST00000409672 NFE4Q86UQ8 179 aa6.37□□□□□ -1.39
SCN9A-203ENST00000409672 ALPK3Q96L96 1907 aa6.37□□□□□ -1.39
SCN9A-203ENST00000409672 KPRPQ5T749 579 aaPredicted RBP6.37□□□□□ -1.39
SCN9A-203ENST00000409672 Q8N976 141 aa6.36□□□□□ -1.39
SCN9A-203ENST00000409672 A6NDX4 124 aa6.36□□□□□ -1.39
SCN9A-203ENST00000409672 K7EP13 123 aa6.36□□□□□ -1.39
SCN9A-203ENST00000409672 LY6LH3BQJ8 138 aa6.36□□□□□ -1.39
SCN9A-203ENST00000409672 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
SCN9A-203ENST00000409672 LOXL1Q08397 574 aaPredicted RBP6.35□□□□□ -1.39
SCN9A-203ENST00000409672 ODF3L1Q8IXM7 274 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 ZFAND2AQ8N6M9 145 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 Q6Q795 121 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 Q6ZSV7 163 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 CCDC168Q8NDH2 2452 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 FAM236AA0A1B0GUQ0 79 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 FAM236BA0A1B0GV22 79 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 BPY2O14599 106 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
SCN9A-203ENST00000409672 TMEM256-PLSCR3K7ERE1 68 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 PLAC8L1A1L4L8 177 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 B5MCH6 92 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 IGLV2-14P01704 120 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 IGFL2Q6UWQ7 119 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 K7EP34 96 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 DEFB114Q30KQ6 69 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 PIK3CD-AS1Q5SR53 167 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 A0A0B4J2C4 111 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 MED14OSP0DP75 135 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 PRR4Q16378 134 aa6.34□□□□□ -1.39
SCN9A-203ENST00000409672 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 A0A0J9YX75 114 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 LRP4O75096 1905 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 K7ERS5 55 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 Q6ZVQ6 151 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 LINC01620Q4KN68 170 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 Q6ZS46 218 aa6.33□□□□□ -1.4
SCN9A-203ENST00000409672 DOPEY1Q5JWR5 2465 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 WFDC13Q8IUB5 93 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 ZNF747Q9BV97 191 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 ODF1Q14990 250 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 CRYGBP07316 175 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 C11orf86A6NJI1 115 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 H0YGX0 51 aa6.32□□□□□ -1.4
SCN9A-203ENST00000409672 MSMPQ1L6U9 139 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 CXCL5P42830 114 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 NOTCH2Q04721 2471 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 PTPRSQ13332 1948 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 LYRM9A8MSI8 78 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 K7EMT4 169 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 SDIM1Q6ZPB5 146 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 EP400Q96L91 3159 aa6.31□□□□□ -1.4
SCN9A-203ENST00000409672 PLA2G1BP04054 148 aaKnown RBP6.3□□□□□ -1.4
SCN9A-203ENST00000409672 LENEPQ9Y5L5 61 aa6.3□□□□□ -1.4
SCN9A-203ENST00000409672 WDR87Q6ZQQ6 2873 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms