RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RBAKDNA6NC62 111 aa8.35□□□□□ -1.07
CHRNA1-203ENST00000409219 SAPCD1Q5SSQ6 148 aa8.35□□□□□ -1.07
CHRNA1-203ENST00000409219 Q8TAT8 98 aa8.35□□□□□ -1.07
CHRNA1-203ENST00000409219 GTSF1Q8WW33 167 aa8.35□□□□□ -1.07
CHRNA1-203ENST00000409219 TMEM18Q96B42 140 aa8.35□□□□□ -1.07
CHRNA1-203ENST00000409219 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
CHRNA1-203ENST00000409219 Q8N976 141 aa8.34□□□□□ -1.07
CHRNA1-203ENST00000409219 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
CHRNA1-203ENST00000409219 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
CHRNA1-203ENST00000409219 APCSP02743 223 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 CRIP1P50238 77 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 HBBP68871 147 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
CHRNA1-203ENST00000409219 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 ZNF138P52744 262 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 LINC00310P59036 64 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 RAB4BP61018 213 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 Q6AWC8 147 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 Q6ZRU5 148 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 TRBV7-9A0A0J9YWB2 115 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 M0R2P5 195 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 DNAJC30Q96LL9 226 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 COX11Q9Y6N1 276 aa8.32□□□□□ -1.08
CHRNA1-203ENST00000409219 A0A1B0GW15 77 aa8.31□□□□□ -1.08
CHRNA1-203ENST00000409219 NUPR1O60356 82 aa8.31□□□□□ -1.08
CHRNA1-203ENST00000409219 RHOHQ15669 191 aa8.31□□□□□ -1.08
CHRNA1-203ENST00000409219 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
CHRNA1-203ENST00000409219 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
CHRNA1-203ENST00000409219 SERF1AO75920 110 aa8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 PRADC1Q9BSG0 188 aa8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
CHRNA1-203ENST00000409219 IGKV2D-24A0A075B6R9 120 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 TRBV6-4A0A1B0GX49 114 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 PCP4L1A6NKN8 68 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 SH2D1AO60880 128 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 GZMBP10144 247 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 RIGQ13278 110 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 ODF1Q14990 250 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 KIAA1644Q3SXP7 199 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
CHRNA1-203ENST00000409219 F2Z2F3 143 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 GNRH2O43555 120 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 CAMPP49913 170 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 RMI2Q96E14 147 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 LENEPQ9Y5L5 61 aa8.28□□□□□ -1.08
CHRNA1-203ENST00000409219 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
CHRNA1-203ENST00000409219 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 CTRLP40313 264 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 ZNF80P51504 273 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 CFAP126Q5VTH2 177 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 KCNS1Q96KK3 526 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 SSBP4Q9BWG4 385 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 ARMS2P0C7Q2 107 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 LINC00694P0DN24 101 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
CHRNA1-203ENST00000409219 LPAP08519 4548 aa8.25□□□□□ -1.09
CHRNA1-203ENST00000409219 PANO1I0J062 215 aa8.25□□□□□ -1.09
CHRNA1-203ENST00000409219 IQCJQ1A5X6 159 aa8.25□□□□□ -1.09
CHRNA1-203ENST00000409219 CIDEAO60543 219 aa8.24□□□□□ -1.09
CHRNA1-203ENST00000409219 ZNF876PQ49A33 203 aa8.24□□□□□ -1.09
CHRNA1-203ENST00000409219 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
CHRNA1-203ENST00000409219 SAMD10Q9BYL1 202 aa8.24□□□□□ -1.09
CHRNA1-203ENST00000409219 C14orf177Q52M58 125 aa8.23□□□□□ -1.09
CHRNA1-203ENST00000409219 FER1L6-AS1Q8NA97 138 aa8.23□□□□□ -1.09
CHRNA1-203ENST00000409219 UBE2WQ96B02 151 aa8.23□□□□□ -1.09
CHRNA1-203ENST00000409219 KLK12Q9UKR0 248 aa8.23□□□□□ -1.09
CHRNA1-203ENST00000409219 GAGE12JA6NER3 117 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 AMTP48728 403 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 PKIAP61925 76 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 GAGE1Q13065 139 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 GAGE4Q13068 117 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 GAGE5Q13069 117 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 NIT1Q86X76 327 aa8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
CHRNA1-203ENST00000409219 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.09
CHRNA1-203ENST00000409219 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 LINC00587B1AMM8 73 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 TSTD3H0UI37 97 aa8.2□□□□□ -1.1
CHRNA1-203ENST00000409219 HSBP1O75506 76 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms