RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 D6R8Y8 96 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 VCYO14598 125 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 AMTP48728 403 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 SUMO2P61956 95 aaKnown RBP9.25□□□□□ -0.93
VPREB1-202ENST00000403807 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 NRACQ8N912 160 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 TMEM70Q9BUB7 260 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 DNAH2Q9P225 4427 aa9.25□□□□□ -0.93
VPREB1-202ENST00000403807 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 TRBV27A0A0K0K1C4 114 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 UBE2L6O14933 153 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 GAGE6Q13070 117 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 LAGE3Q14657 143 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 ORMDL3Q8N138 153 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 Q8N3U1 123 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
VPREB1-202ENST00000403807 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 TRAV8-3A0A0A6YYJ7 113 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 PHOX2AO14813 284 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 TNFRSF6BO95407 300 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 APCSP02743 223 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 COX19Q49B96 90 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 KLK12Q9UKR0 248 aa9.23□□□□□ -0.93
VPREB1-202ENST00000403807 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
VPREB1-202ENST00000403807 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
VPREB1-202ENST00000403807 KIR2DL4Q99706 377 aa9.22□□□□□ -0.93
VPREB1-202ENST00000403807 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.93
VPREB1-202ENST00000403807 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 H7C423 109 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 ANGP03950 147 aaKnown RBP9.21□□□□□ -0.94
VPREB1-202ENST00000403807 FCER1GP30273 86 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 RBX1P62877 108 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
VPREB1-202ENST00000403807 GNB1LQ9BYB4 327 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 Q9HAA7 133 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 LAMTOR2Q9Y2Q5 125 aa9.21□□□□□ -0.94
VPREB1-202ENST00000403807 TCAPO15273 167 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 TSHBP01222 138 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 NPYP01303 97 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 HLA-DQA1P01909 254 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 TNP2Q05952 138 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 Q0VG73 95 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
VPREB1-202ENST00000403807 Q8N976 141 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 RMI2Q96E14 147 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
VPREB1-202ENST00000403807 PSCAO43653 123 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 CRPP02741 224 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 ESDP10768 282 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 UBE2WQ96B02 151 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 COX11Q9Y6N1 276 aa9.19□□□□□ -0.94
VPREB1-202ENST00000403807 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.18□□□□□ -0.94
VPREB1-202ENST00000403807 IGKV2-29A2NJV5 120 aaPredicted RBP9.18□□□□□ -0.94
VPREB1-202ENST00000403807 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
VPREB1-202ENST00000403807 PRSS47A8MTI9 375 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 MT-ND6P03923 174 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 RNASEKQ6P5S7 137 aaKnown RBP9.17□□□□□ -0.94
VPREB1-202ENST00000403807 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 C20orf203Q8NBC4 194 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 MAP1LC3AQ9H492 121 aa9.17□□□□□ -0.94
VPREB1-202ENST00000403807 IGLV4-60A0A075B6I1 120 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 IGKV2D-24A0A075B6R9 120 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 TGIF2-C20orf24A0A0A6YYL0 155 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 LOC389332A0A1B0GUA5 103 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 EREGO14944 169 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 FGF6P10767 208 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 ZNF25P17030 456 aaPredicted RBP9.16□□□□□ -0.94
VPREB1-202ENST00000403807 RAB5AP20339 215 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 SMAGPQ0VAQ4 97 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 MIAQ16674 131 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 KIAA1644Q3SXP7 199 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 TMEM18Q96B42 140 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 TMEM101Q96IK0 257 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
VPREB1-202ENST00000403807 REG3AQ06141 175 aa9.15□□□□□ -0.94
VPREB1-202ENST00000403807 FABP9Q0Z7S8 132 aa9.15□□□□□ -0.94
VPREB1-202ENST00000403807 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
VPREB1-202ENST00000403807 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
VPREB1-202ENST00000403807 SMCO4Q9NRQ5 59 aa9.15□□□□□ -0.94
VPREB1-202ENST00000403807 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.95
VPREB1-202ENST00000403807 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
VPREB1-202ENST00000403807 TRAPPC1Q9Y5R8 145 aa9.14□□□□□ -0.95
VPREB1-202ENST00000403807 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
VPREB1-202ENST00000403807 DGAT2L7PQ6IED9 249 aa9.13□□□□□ -0.95
VPREB1-202ENST00000403807 CLPSL2Q6UWE3 100 aa9.13□□□□□ -0.95
VPREB1-202ENST00000403807 MRPL52Q86TS9 123 aaKnown RBP9.13□□□□□ -0.95
VPREB1-202ENST00000403807 Q8N8P6 123 aa9.13□□□□□ -0.95
VPREB1-202ENST00000403807 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
VPREB1-202ENST00000403807 A0A087WTM6 91 aa9.12□□□□□ -0.95
VPREB1-202ENST00000403807 ALKBH7Q9BT30 221 aaPredicted RBP9.12□□□□□ -0.95
VPREB1-202ENST00000403807 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
VPREB1-202ENST00000403807 K7EMI3 77 aa9.11□□□□□ -0.95
VPREB1-202ENST00000403807 YPEL4Q96NS1 127 aa9.11□□□□□ -0.95
VPREB1-202ENST00000403807 CSDC2Q9Y534 153 aaKnown RBP9.11□□□□□ -0.95
VPREB1-202ENST00000403807 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
VPREB1-202ENST00000403807 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms