RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 TMEM243Q9BU79 118 aa11.59□□□□□ -0.55
PTCHD3P3-201ENST00000403073 NPYP01303 97 aa11.58□□□□□ -0.56
PTCHD3P3-201ENST00000403073 SUMO2P61956 95 aaKnown RBP11.58□□□□□ -0.56
PTCHD3P3-201ENST00000403073 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 VCYO14598 125 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 TSHBP01222 138 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 PPBPP02775 128 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 Q8N976 141 aa11.57□□□□□ -0.56
PTCHD3P3-201ENST00000403073 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 LINC00336Q6ZUF6 198 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 PRELID3AQ96N28 172 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 Q9HAA7 133 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
PTCHD3P3-201ENST00000403073 TGIF2-C20orf24A0A0A6YYL0 155 aa11.55□□□□□ -0.56
PTCHD3P3-201ENST00000403073 APCSP02743 223 aa11.55□□□□□ -0.56
PTCHD3P3-201ENST00000403073 RBX1P62877 108 aa11.55□□□□□ -0.56
PTCHD3P3-201ENST00000403073 Q6ZRN7 208 aaPredicted RBP11.55□□□□□ -0.56
PTCHD3P3-201ENST00000403073 UBE2L6O14933 153 aa11.54□□□□□ -0.56
PTCHD3P3-201ENST00000403073 PKIAP61925 76 aa11.54□□□□□ -0.56
PTCHD3P3-201ENST00000403073 ELOBQ15370 118 aa11.54□□□□□ -0.56
PTCHD3P3-201ENST00000403073 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
PTCHD3P3-201ENST00000403073 GNB1LQ9BYB4 327 aa11.54□□□□□ -0.56
PTCHD3P3-201ENST00000403073 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
PTCHD3P3-201ENST00000403073 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
PTCHD3P3-201ENST00000403073 PHOX2AO14813 284 aa11.53□□□□□ -0.56
PTCHD3P3-201ENST00000403073 TNP2Q05952 138 aa11.53□□□□□ -0.56
PTCHD3P3-201ENST00000403073 KIAA1644Q3SXP7 199 aa11.53□□□□□ -0.56
PTCHD3P3-201ENST00000403073 DNAH17Q9UFH2 4485 aa11.52□□□□□ -0.56
PTCHD3P3-201ENST00000403073 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 ANGP03950 147 aaKnown RBP11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 ESDP10768 282 aa11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 FCER1GP30273 86 aa11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 RPL32P62910 135 aaKnown RBP11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 LAGE3Q14657 143 aa11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 UBE2WQ96B02 151 aa11.52□□□□□ -0.57
PTCHD3P3-201ENST00000403073 IGLV4-60A0A075B6I1 120 aa11.51□□□□□ -0.57
PTCHD3P3-201ENST00000403073 LOC389332A0A1B0GUA5 103 aa11.51□□□□□ -0.57
PTCHD3P3-201ENST00000403073 COX19Q49B96 90 aa11.51□□□□□ -0.57
PTCHD3P3-201ENST00000403073 KIR2DL4Q99706 377 aa11.51□□□□□ -0.57
PTCHD3P3-201ENST00000403073 SMIM2Q9BVW6 85 aa11.51□□□□□ -0.57
PTCHD3P3-201ENST00000403073 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
PTCHD3P3-201ENST00000403073 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
PTCHD3P3-201ENST00000403073 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
PTCHD3P3-201ENST00000403073 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
PTCHD3P3-201ENST00000403073 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
PTCHD3P3-201ENST00000403073 TCAPO15273 167 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 FGF6P10767 208 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 CBLN2Q8IUK8 224 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 LINC00269Q8N2A0 174 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 YPEL4Q96NS1 127 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 MRPL18Q9H0U6 180 aaKnown RBP11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
PTCHD3P3-201ENST00000403073 FAT2Q9NYQ8 4349 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 H7C423 109 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 FABP9Q0Z7S8 132 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 RNASEKQ6P5S7 137 aaKnown RBP11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 SMCO4Q9NRQ5 59 aa11.48□□□□□ -0.57
PTCHD3P3-201ENST00000403073 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
PTCHD3P3-201ENST00000403073 CRPP02741 224 aa11.47□□□□□ -0.57
PTCHD3P3-201ENST00000403073 MT-ND6P03923 174 aa11.47□□□□□ -0.57
PTCHD3P3-201ENST00000403073 IGKV2D-24A0A075B6R9 120 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 PSCAO43653 123 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 Q0VG73 95 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 TM2D2Q9BX73 214 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 PRR34Q9NV39 138 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 TRAPPC1Q9Y5R8 145 aa11.46□□□□□ -0.57
PTCHD3P3-201ENST00000403073 RAB5AP20339 215 aa11.45□□□□□ -0.58
PTCHD3P3-201ENST00000403073 REG3AQ06141 175 aa11.45□□□□□ -0.58
PTCHD3P3-201ENST00000403073 Q8N8P6 123 aa11.45□□□□□ -0.58
PTCHD3P3-201ENST00000403073 EPPK1P58107 5090 aaKnown RBP11.45□□□□□ -0.58
PTCHD3P3-201ENST00000403073 RMI2Q96E14 147 aa11.44□□□□□ -0.58
PTCHD3P3-201ENST00000403073 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
PTCHD3P3-201ENST00000403073 A0A087WTM6 91 aa11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 MIAQ16674 131 aa11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 MRPL52Q86TS9 123 aaKnown RBP11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
PTCHD3P3-201ENST00000403073 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 RPL39P62891 51 aaKnown RBP11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 OR5A1Q8NGJ0 315 aa11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 UBE2D4Q9Y2X8 147 aa11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
PTCHD3P3-201ENST00000403073 IGLV10-54A0A075B6I4 117 aa11.41□□□□□ -0.58
PTCHD3P3-201ENST00000403073 LRCOL1A6NCL2 159 aa11.41□□□□□ -0.58
PTCHD3P3-201ENST00000403073 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
PTCHD3P3-201ENST00000403073 TMEM18Q96B42 140 aa11.41□□□□□ -0.58
PTCHD3P3-201ENST00000403073 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms