RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 WNK1Q9H4A3 2382 aa11.67□□□□□ -0.54
CHRFAM7A-203ENST00000401522 VWFP04275 2813 aa11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 WFDC9Q8NEX5 89 aa11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 ZNF256Q9Y2P7 627 aaPredicted RBP11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 SRSF9Q13242 221 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 SPATA3Q8NHX4 192 aa11.66□□□□□ -0.54
CHRFAM7A-203ENST00000401522 UBE2D1P51668 147 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 EMP1P54849 157 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 NFE4Q86UQ8 179 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 A0A0J9YY99 117 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TEX48A0A1B0GUV7 120 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TMEM170BQ5T4T1 132 aa11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 SPANXB1Q9NS25 103 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TRRAPQ9Y4A5 3859 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 H3BMG7 143 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 I3L3M4 83 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 ZNRF2Q8NHG8 242 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 DEFB104AQ8WTQ1 72 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 ANK2Q01484 3957 aa11.63□□□□□ -0.55
CHRFAM7A-203ENST00000401522 GAGE13Q4V321 117 aa11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 MRPL16Q9NX20 251 aaKnown RBP11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 AGRNO00468 2067 aa11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 WFDC2Q14508 124 aa11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 C20orf203Q8NBC4 194 aa11.62□□□□□ -0.55
CHRFAM7A-203ENST00000401522 A8MTW9 85 aa11.61□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 J3QQQ9 107 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 J3QR89 54 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 P0DMU3 169 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 FAM231AP0DMU4 169 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 FAM231CP0DMU5 169 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 SLC25A29Q8N8R3 303 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 PRO0461Q9UI25 63 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 INSL3P51460 131 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
CHRFAM7A-203ENST00000401522 LEPROTO15243 131 aa11.59□□□□□ -0.55
CHRFAM7A-203ENST00000401522 AMELXQ99217 191 aa11.59□□□□□ -0.55
CHRFAM7A-203ENST00000401522 KNCNA6PVL3 124 aa11.58□□□□□ -0.55
CHRFAM7A-203ENST00000401522 IGLV1-51P01701 117 aa11.58□□□□□ -0.55
CHRFAM7A-203ENST00000401522 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.55
CHRFAM7A-203ENST00000401522 DYNLRB2Q8TF09 96 aa11.58□□□□□ -0.55
CHRFAM7A-203ENST00000401522 TMEM223A0PJW6 202 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 TSPAN13O95857 204 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 PIK3CD-AS1Q5SR53 167 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 C9orf66Q5T8R8 295 aa11.58□□□□□ -0.56
CHRFAM7A-203ENST00000401522 IGLV4-3A0A075B6K6 122 aa11.57□□□□□ -0.56
CHRFAM7A-203ENST00000401522 DEFB131AP59861 70 aa11.57□□□□□ -0.56
CHRFAM7A-203ENST00000401522 OPRPNQ99935 248 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-203ENST00000401522 VCX2Q9H322 139 aa11.57□□□□□ -0.56
CHRFAM7A-203ENST00000401522 H3BMM0 161 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 A8MWV9 139 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 WIPF1O43516 503 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 TMEM61Q8N0U2 210 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 PTH2Q96A98 100 aa11.56□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RHODO00212 210 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 APOMO95445 188 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 ZNF22P17026 224 aaPredicted RBP11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 CRYBA4P53673 196 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 UBE2D3P61077 147 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 UBE2D2P62837 147 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 PKD1L1Q8TDX9 2849 aa11.55□□□□□ -0.56
CHRFAM7A-203ENST00000401522 M0R2P5 195 aa11.54□□□□□ -0.56
CHRFAM7A-203ENST00000401522 ZNF415Q09FC8 603 aa11.54□□□□□ -0.56
CHRFAM7A-203ENST00000401522 SH2D6Q7Z4S9 175 aa11.54□□□□□ -0.56
CHRFAM7A-203ENST00000401522 LOC107984156A0A0G2JMH3 177 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1BA6NDE4 496 aaKnown RBP11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1EA6NEQ0 496 aaKnown RBP11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 RBMY1DP0C7P1 496 aaKnown RBP11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 CFC1BP0CG36 223 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 CFC1P0CG37 223 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 ARL17AQ8IVW1 177 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 LINC00467Q9BRT7 94 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
CHRFAM7A-203ENST00000401522 A0A0J9YXV3 536 aa11.52□□□□□ -0.56
CHRFAM7A-203ENST00000401522 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.56
CHRFAM7A-203ENST00000401522 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
CHRFAM7A-203ENST00000401522 HTN1P15515 57 aa11.52□□□□□ -0.57
CHRFAM7A-203ENST00000401522 PSMB2P49721 201 aa11.52□□□□□ -0.57
CHRFAM7A-203ENST00000401522 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
CHRFAM7A-203ENST00000401522 C10orf126Q8N4M7 172 aa11.52□□□□□ -0.57
CHRFAM7A-203ENST00000401522 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
CHRFAM7A-203ENST00000401522 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
CHRFAM7A-203ENST00000401522 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
CHRFAM7A-203ENST00000401522 PRO1854Q9UHT4 67 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms