RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 C19orf71A6NCJ1 209 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 IFNA1P01562 189 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 SULT1A2P50226 295 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 LYZL1Q6UWQ5 148 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 GFRA4Q9GZZ7 299 aa7.1□□□□□ -1.27
SRMP1-201ENST00000398959 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 CHTF8P0CG12 524 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 NTF3P20783 257 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 AMTP48728 403 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 MEF2BQ02080 365 aaPredicted RBP7.09□□□□□ -1.27
SRMP1-201ENST00000398959 CIRBPQ14011 172 aaKnown RBP7.09□□□□□ -1.27
SRMP1-201ENST00000398959 COTL1Q14019 142 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 Q6ZRU5 148 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 C9orf62Q8N4C0 152 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 RNF185Q96GF1 192 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 BIN3Q9NQY0 253 aa7.09□□□□□ -1.27
SRMP1-201ENST00000398959 A0A087WYN8 130 aa7.08□□□□□ -1.28
SRMP1-201ENST00000398959 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
SRMP1-201ENST00000398959 PDE6DO43924 150 aa7.08□□□□□ -1.28
SRMP1-201ENST00000398959 SLPIP03973 132 aa7.08□□□□□ -1.28
SRMP1-201ENST00000398959 MED9Q9NWA0 146 aa7.08□□□□□ -1.28
SRMP1-201ENST00000398959 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
SRMP1-201ENST00000398959 TWIST1Q15672 202 aa7.07□□□□□ -1.28
SRMP1-201ENST00000398959 EIF5AL1Q6IS14 154 aaKnown RBP7.07□□□□□ -1.28
SRMP1-201ENST00000398959 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
SRMP1-201ENST00000398959 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
SRMP1-201ENST00000398959 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
SRMP1-201ENST00000398959 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 MT1HL1P0DM35 61 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 CTRLP40313 264 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 AMMECR1LQ6DCA0 310 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 SLC51BQ86UW2 128 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 C7orf33Q8WU49 177 aa7.06□□□□□ -1.28
SRMP1-201ENST00000398959 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 PHOX2AO14813 284 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 RPS10P46783 165 aaKnown RBP7.05□□□□□ -1.28
SRMP1-201ENST00000398959 COX6A2Q02221 97 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 HIGD2BQ4VC39 106 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 RNASEKQ6P5S7 137 aaKnown RBP7.05□□□□□ -1.28
SRMP1-201ENST00000398959 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 NUDT10Q8NFP7 164 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 NUDT11Q96G61 164 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
SRMP1-201ENST00000398959 IGKV2-24A0A0C4DH68 120 aa7.04□□□□□ -1.28
SRMP1-201ENST00000398959 NDUFS6O75380 124 aaKnown RBP7.04□□□□□ -1.28
SRMP1-201ENST00000398959 BCL2P10415 239 aa7.04□□□□□ -1.28
SRMP1-201ENST00000398959 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
SRMP1-201ENST00000398959 SMIM15Q7Z3B0 74 aa7.04□□□□□ -1.28
SRMP1-201ENST00000398959 CHCHD10Q8WYQ3 142 aaPredicted RBP7.04□□□□□ -1.28
SRMP1-201ENST00000398959 CNFNQ9BYD5 112 aa7.04□□□□□ -1.28
SRMP1-201ENST00000398959 RNASE7Q9H1E1 156 aaKnown RBP7.04□□□□□ -1.28
SRMP1-201ENST00000398959 RPP21Q9H633 154 aaKnown RBP7.04□□□□□ -1.28
SRMP1-201ENST00000398959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.03□□□□□ -1.28
SRMP1-201ENST00000398959 IGKV2-29A2NJV5 120 aaPredicted RBP7.03□□□□□ -1.28
SRMP1-201ENST00000398959 NCR2O95944 276 aa7.03□□□□□ -1.28
SRMP1-201ENST00000398959 APCSP02743 223 aa7.03□□□□□ -1.28
SRMP1-201ENST00000398959 GTSF1Q8WW33 167 aa7.03□□□□□ -1.28
SRMP1-201ENST00000398959 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
SRMP1-201ENST00000398959 H7C423 109 aa7.02□□□□□ -1.29
SRMP1-201ENST00000398959 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
SRMP1-201ENST00000398959 TEX261Q6UWH6 196 aa7.02□□□□□ -1.29
SRMP1-201ENST00000398959 STPG4Q8N801 248 aa7.02□□□□□ -1.29
SRMP1-201ENST00000398959 PRSS3P2Q8NHM4 247 aa7.02□□□□□ -1.29
SRMP1-201ENST00000398959 TNXBP22105 4242 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
SRMP1-201ENST00000398959 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 K7EN84 100 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 FGF6P10767 208 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 LYPD6BQ8NI32 183 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
SRMP1-201ENST00000398959 ZNF25P17030 456 aaPredicted RBP7□□□□□ -1.29
SRMP1-201ENST00000398959 PMCHP20382 165 aa7□□□□□ -1.29
SRMP1-201ENST00000398959 FOXA3P55318 350 aaPredicted RBP7□□□□□ -1.29
SRMP1-201ENST00000398959 ALKAL2Q6UX46 152 aa7□□□□□ -1.29
SRMP1-201ENST00000398959 TMEM101Q96IK0 257 aa7□□□□□ -1.29
SRMP1-201ENST00000398959 BTF3L4Q96K17 158 aa7□□□□□ -1.29
SRMP1-201ENST00000398959 A0A096LNI7 61 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 I3L3M4 83 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 GATCO43716 136 aaKnown RBP6.99□□□□□ -1.29
SRMP1-201ENST00000398959 XCL1P47992 114 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 PRR3P79522 188 aaKnown RBP6.99□□□□□ -1.29
SRMP1-201ENST00000398959 FOXI1Q12951 378 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
SRMP1-201ENST00000398959 A8MWL6 223 aa6.98□□□□□ -1.29
SRMP1-201ENST00000398959 CCL25O15444 150 aa6.98□□□□□ -1.29
SRMP1-201ENST00000398959 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
SRMP1-201ENST00000398959 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 LINC00959A0A1B0GUT2 108 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 SS18Q15532 418 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 BORCS7Q96B45 105 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 CARD19Q96LW7 228 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 LINC01600Q96MT4 127 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 ST20Q9HBF5 79 aa6.97□□□□□ -1.29
SRMP1-201ENST00000398959 TRBV6-5A0A0K0K1A5 114 aa6.96□□□□□ -1.3
SRMP1-201ENST00000398959 FAM231BA6NCW3 169 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms