RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FABP2P12104 132 aa6.05□□□□□ -1.44
PTPRD-204ENST00000397606 XCL1P47992 114 aa6.05□□□□□ -1.44
PTPRD-204ENST00000397606 ESDP10768 282 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 SLC25A29Q8N8R3 303 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 M0QY20 66 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 IGHV3-30P01768 117 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 IGHV3-33P01772 117 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 IGHV3-30-3P0DP02 117 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 IGHV3-30-5P0DP03 117 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 Q9HAA7 133 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 P0DMU3 169 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 HSD52Q0P140 79 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 DNAH14Q0VDD8 3507 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 TOMM6Q96B49 74 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 GTSF1LQ9H1H1 148 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 C1orf158Q8N1D5 194 aa6.04□□□□□ -1.44
PTPRD-204ENST00000397606 RPL39P62891 51 aaKnown RBP6.03□□□□□ -1.44
PTPRD-204ENST00000397606 NEXN-AS1Q8NBZ9 246 aa6.03□□□□□ -1.44
PTPRD-204ENST00000397606 FRYQ5TBA9 3013 aa6.03□□□□□ -1.44
PTPRD-204ENST00000397606 PRM2P04554 102 aa6.03□□□□□ -1.44
PTPRD-204ENST00000397606 RNF183Q96D59 192 aa6.03□□□□□ -1.44
PTPRD-204ENST00000397606 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
PTPRD-204ENST00000397606 TRBV6-5A0A0K0K1A5 114 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 CRYGDP07320 174 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 NDUFA12Q9UI09 145 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 DNAL4O96015 105 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 WFDC9Q8NEX5 89 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 RNF185Q96GF1 192 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 LINC00467Q9BRT7 94 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 TM2D2Q9BX73 214 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 G3V4G9 280 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 S100A7L2Q5SY68 101 aa6.02□□□□□ -1.45
PTPRD-204ENST00000397606 SFTA2Q6UW10 78 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-204ENST00000397606 NHP2Q9NX24 153 aaKnown RBP6.01□□□□□ -1.45
PTPRD-204ENST00000397606 KLK12Q9UKR0 248 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 CBY1Q9Y3M2 126 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 A0A0J9YWU9 116 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 H7C423 109 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 COX7A2LO14548 114 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 NUPR1O60356 82 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 ZNF664Q8N3J9 261 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 C10orf126Q8N4M7 172 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 ORAOV1Q8WV07 137 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 FLNCQ14315 2725 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 A0A0J9YXV3 536 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 J3QQQ9 107 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 U3KQK5 164 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 GAGE10A6NGK3 116 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
PTPRD-204ENST00000397606 RNASE8Q8TDE3 154 aaKnown RBP6.01□□□□□ -1.45
PTPRD-204ENST00000397606 IGLV10-54A0A075B6I4 117 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 TRBV27A0A0K0K1C4 114 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 LEPROTO15243 131 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 RPL32P62910 135 aaKnown RBP6□□□□□ -1.45
PTPRD-204ENST00000397606 ATRQ13535 2644 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 TRBV6-8A0A0A6YYG3 113 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 CST9LQ9H4G1 147 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 SCRT2Q9NQ03 307 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 BAALCQ8WXS3 180 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 YPEL4Q96NS1 127 aa6□□□□□ -1.45
PTPRD-204ENST00000397606 PFN2P35080 140 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 KPRPQ5T749 579 aaPredicted RBP5.99□□□□□ -1.45
PTPRD-204ENST00000397606 RETNQ9HD89 108 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 GHRHP01286 108 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 LINC01545Q5VT33 79 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 PKIGQ9Y2B9 76 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 NPC2P61916 151 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 SLC25A20O43772 301 aa5.99□□□□□ -1.45
PTPRD-204ENST00000397606 NANOS2P60321 138 aaKnown RBP5.98□□□□□ -1.45
PTPRD-204ENST00000397606 PTH2Q96A98 100 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 COX8AP10176 69 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 NRACQ8N912 160 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 BAHCC1Q9P281 2608 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 CCL25O15444 150 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 NHLRC4P0CG21 123 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-204ENST00000397606 CRYBA4P53673 196 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 HERV-K104P63124 156 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 COX11Q9Y6N1 276 aa5.98□□□□□ -1.45
PTPRD-204ENST00000397606 Q6ZUT4 128 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 OVOL2Q9BRP0 275 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 POLR2KP53803 58 aaKnown RBP5.97□□□□□ -1.45
PTPRD-204ENST00000397606 CAMK2N2Q96S95 79 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 NXPH4O95158 308 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 IGLC3P0DOY3 106 aa5.97□□□□□ -1.45
PTPRD-204ENST00000397606 CEMP1Q6PRD7 247 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-204ENST00000397606 FREM2Q5SZK8 3169 aa5.96□□□□□ -1.45
PTPRD-204ENST00000397606 REG3AQ06141 175 aa5.96□□□□□ -1.45
PTPRD-204ENST00000397606 LELP1Q5T871 98 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 315.5 ms