RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 H7C423 109 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 MRPL23Q16540 153 aaKnown RBP13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GYPEP15421 78 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GAGE1Q13065 139 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GAGE4Q13068 117 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GAGE5Q13069 117 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 C2orf66Q6UXQ4 117 aa13.36□□□□□ -0.27
TSPAN4-204ENST00000397404 ERASQ7Z444 233 aa13.35□□□□□ -0.27
TSPAN4-204ENST00000397404 SPATA12Q7Z6I5 190 aa13.35□□□□□ -0.27
TSPAN4-204ENST00000397404 C20orf203Q8NBC4 194 aa13.35□□□□□ -0.27
TSPAN4-204ENST00000397404 TMEM141Q96I45 108 aa13.35□□□□□ -0.27
TSPAN4-204ENST00000397404 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
TSPAN4-204ENST00000397404 DEFA6Q01524 100 aa13.34□□□□□ -0.27
TSPAN4-204ENST00000397404 PMCHL1Q16048 86 aa13.34□□□□□ -0.27
TSPAN4-204ENST00000397404 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
TSPAN4-204ENST00000397404 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
TSPAN4-204ENST00000397404 ICOSQ9Y6W8 199 aa13.34□□□□□ -0.27
TSPAN4-204ENST00000397404 TRAV10A0A0B4J240 114 aa13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 C20orf202A1L168 122 aa13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 SMIM6P0DI80 62 aa13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 PET117Q6UWS5 81 aa13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 IFI27L1Q96BM0 104 aa13.33□□□□□ -0.28
TSPAN4-204ENST00000397404 TRBV25-1A0A075B6N4 114 aa13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 JOSD1Q15040 202 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 Q6ZTC4 211 aa13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 NEGR1Q7Z3B1 354 aa13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
TSPAN4-204ENST00000397404 PKIAP61925 76 aa13.31□□□□□ -0.28
TSPAN4-204ENST00000397404 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
TSPAN4-204ENST00000397404 SPANXA1Q9NS26 97 aa13.31□□□□□ -0.28
TSPAN4-204ENST00000397404 Q9UF83 564 aa13.31□□□□□ -0.28
TSPAN4-204ENST00000397404 TENM3Q9P273 2699 aa13.3□□□□□ -0.28
TSPAN4-204ENST00000397404 DEFB131BA0A096LNP1 70 aa13.3□□□□□ -0.28
TSPAN4-204ENST00000397404 TIRAPP58753 221 aa13.3□□□□□ -0.28
TSPAN4-204ENST00000397404 PHLDA1Q8WV24 401 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-204ENST00000397404 SYS1-DBNDD2H3BUS1 97 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 C3orf79P0CE67 100 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 HTN3P15516 51 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 KRTDAPP60985 99 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 Q6ZN92 141 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 CSDC2Q9Y534 153 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 HUWE1Q7Z6Z7 4374 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 NANOS2P60321 138 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 C15orf53Q8NAA6 179 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 TMEM243Q9BU79 118 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 CHCHD7Q9BUK0 85 aa13.29□□□□□ -0.28
TSPAN4-204ENST00000397404 TRAV12-1A0A0B4J245 112 aa13.28□□□□□ -0.28
TSPAN4-204ENST00000397404 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
TSPAN4-204ENST00000397404 ZNF25P17030 456 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-204ENST00000397404 DNAH9Q9NYC9 4486 aa13.27□□□□□ -0.28
TSPAN4-204ENST00000397404 IGHV3-38A0A0C4DH36 116 aa13.27□□□□□ -0.29
TSPAN4-204ENST00000397404 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
TSPAN4-204ENST00000397404 UBE2L6O14933 153 aa13.27□□□□□ -0.29
TSPAN4-204ENST00000397404 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-204ENST00000397404 A0A0J9YY99 117 aa13.26□□□□□ -0.29
TSPAN4-204ENST00000397404 LGALS9CQ6DKI2 356 aa13.26□□□□□ -0.29
TSPAN4-204ENST00000397404 PRSS1P07477 247 aa13.25□□□□□ -0.29
TSPAN4-204ENST00000397404 SCGB1D1O95968 90 aa13.24□□□□□ -0.29
TSPAN4-204ENST00000397404 MRPS36P82909 103 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-204ENST00000397404 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
TSPAN4-204ENST00000397404 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
TSPAN4-204ENST00000397404 A0A096LPF7 62 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 PYY3Q5JQD4 70 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 LINC01545Q5VT33 79 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 TMEM101Q96IK0 257 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 DGAT2L7PQ6IED9 249 aa13.23□□□□□ -0.29
TSPAN4-204ENST00000397404 PMVKQ15126 192 aa13.22□□□□□ -0.29
TSPAN4-204ENST00000397404 LELP1Q5T871 98 aa13.22□□□□□ -0.29
TSPAN4-204ENST00000397404 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
TSPAN4-204ENST00000397404 AMMECR1LQ6DCA0 310 aa13.21□□□□□ -0.3
TSPAN4-204ENST00000397404 STAB2Q8WWQ8 2551 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 A0A087WX48 190 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 A0A1B0GUV1 79 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 S100A12P80511 92 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 VCX2Q9H322 139 aa13.2□□□□□ -0.3
TSPAN4-204ENST00000397404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 FGF6P10767 208 aa13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 PLNP26678 52 aa13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 CHCHD5Q9BSY4 110 aa13.19□□□□□ -0.3
TSPAN4-204ENST00000397404 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
TSPAN4-204ENST00000397404 TCTAP57738 103 aa13.18□□□□□ -0.3
TSPAN4-204ENST00000397404 TEX43Q6ZNM6 134 aa13.18□□□□□ -0.3
TSPAN4-204ENST00000397404 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
TSPAN4-204ENST00000397404 TRAV8-6A0A0B4J262 113 aa13.17□□□□□ -0.3
TSPAN4-204ENST00000397404 F8VRH5 84 aa13.17□□□□□ -0.3
TSPAN4-204ENST00000397404 ODF1Q14990 250 aa13.17□□□□□ -0.3
TSPAN4-204ENST00000397404 LINC00518Q8N0U6 118 aa13.17□□□□□ -0.3
TSPAN4-204ENST00000397404 AMELXQ99217 191 aa13.17□□□□□ -0.3
TSPAN4-204ENST00000397404 LYPD5Q6UWN5 251 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms