RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 LINC01006Q8NI28 216 aa12.02□□□□□ -0.48
TRIM39-205ENST00000396551 MRPL16Q9NX20 251 aaKnown RBP12.02□□□□□ -0.48
TRIM39-205ENST00000396551 XCL2Q9UBD3 114 aa12.02□□□□□ -0.48
TRIM39-205ENST00000396551 C12orf74Q32Q52 190 aa12.02□□□□□ -0.49
TRIM39-205ENST00000396551 TMEM170BQ5T4T1 132 aa12.02□□□□□ -0.49
TRIM39-205ENST00000396551 SPCS1Q9Y6A9 102 aa12.02□□□□□ -0.49
TRIM39-205ENST00000396551 IGLV4-3A0A075B6K6 122 aa12.01□□□□□ -0.49
TRIM39-205ENST00000396551 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
TRIM39-205ENST00000396551 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
TRIM39-205ENST00000396551 ACANP16112 2415 aa12.01□□□□□ -0.49
TRIM39-205ENST00000396551 HERVK_113P61574 105 aa12.01□□□□□ -0.49
TRIM39-205ENST00000396551 FABP2P12104 132 aa12□□□□□ -0.49
TRIM39-205ENST00000396551 BEAN1Q3B7T3 259 aa12□□□□□ -0.49
TRIM39-205ENST00000396551 RNASE1P07998 156 aaKnown RBP12□□□□□ -0.49
TRIM39-205ENST00000396551 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
TRIM39-205ENST00000396551 IGLL5B9A064 214 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 SPXQ9BT56 116 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 C16orf95Q9H693 158 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 SCGB1D4Q6XE38 83 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 STHQ8IWL8 128 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-205ENST00000396551 A0A1B0GWB2 263 aa11.99□□□□□ -0.49
TRIM39-205ENST00000396551 J3QKU1 62 aa11.98□□□□□ -0.49
TRIM39-205ENST00000396551 AMELXQ99217 191 aa11.98□□□□□ -0.49
TRIM39-205ENST00000396551 ITPR2Q14571 2701 aa11.98□□□□□ -0.49
TRIM39-205ENST00000396551 RS1O15537 224 aa11.98□□□□□ -0.49
TRIM39-205ENST00000396551 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-205ENST00000396551 A0A0J9YY99 117 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-205ENST00000396551 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 ZNF22P17026 224 aaPredicted RBP11.97□□□□□ -0.49
TRIM39-205ENST00000396551 OR5A1Q8NGJ0 315 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 PYGO1Q9Y3Y4 419 aa11.97□□□□□ -0.49
TRIM39-205ENST00000396551 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.49
TRIM39-205ENST00000396551 IL17DQ8TAD2 202 aa11.96□□□□□ -0.49
TRIM39-205ENST00000396551 VCX2Q9H322 139 aa11.96□□□□□ -0.49
TRIM39-205ENST00000396551 PGPEP1Q9NXJ5 209 aa11.96□□□□□ -0.49
TRIM39-205ENST00000396551 RHODO00212 210 aa11.96□□□□□ -0.49
TRIM39-205ENST00000396551 J3QQQ9 107 aa11.95□□□□□ -0.5
TRIM39-205ENST00000396551 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
TRIM39-205ENST00000396551 SRSF9Q13242 221 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRIM39-205ENST00000396551 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
TRIM39-205ENST00000396551 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
TRIM39-205ENST00000396551 MTORP42345 2549 aa11.93□□□□□ -0.5
TRIM39-205ENST00000396551 ADARB2-AS1A8MUL3 147 aa11.93□□□□□ -0.5
TRIM39-205ENST00000396551 LEPROTO15243 131 aa11.93□□□□□ -0.5
TRIM39-205ENST00000396551 RRN3P1Q2M238 152 aa11.93□□□□□ -0.5
TRIM39-205ENST00000396551 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
TRIM39-205ENST00000396551 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 G3V4G9 280 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 SMIM20Q8N5G0 67 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 WFDC10AQ9H1F0 79 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 GEMIN7Q9H840 131 aaKnown RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 UBE2D4Q9Y2X8 147 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 HELZ2Q9BYK8 2649 aaKnown RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 GIG44P09565 113 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 UBE2D1P51668 147 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
TRIM39-205ENST00000396551 SPANXB1Q9NS25 103 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-205ENST00000396551 TRGV1A0A0A0MS02 117 aa11.91□□□□□ -0.5
TRIM39-205ENST00000396551 HILS1P60008 231 aa11.91□□□□□ -0.5
TRIM39-205ENST00000396551 MRPS36P82909 103 aaKnown RBP11.9□□□□□ -0.5
TRIM39-205ENST00000396551 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 SMR3AQ99954 134 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 UNC79Q9P2D8 2635 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 IGLV1-51P01701 117 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 C19orf73Q9NVV2 129 aa11.9□□□□□ -0.5
TRIM39-205ENST00000396551 Q6ZTI0 123 aa11.89□□□□□ -0.51
TRIM39-205ENST00000396551 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
TRIM39-205ENST00000396551 Q6ZUT4 128 aa11.89□□□□□ -0.51
TRIM39-205ENST00000396551 ZNF418Q8TF45 676 aaPredicted RBP11.89□□□□□ -0.51
TRIM39-205ENST00000396551 RPL24P83731 157 aaKnown RBP11.88□□□□□ -0.51
TRIM39-205ENST00000396551 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
TRIM39-205ENST00000396551 JMJD1CQ15652 2540 aa11.87□□□□□ -0.51
TRIM39-205ENST00000396551 C10orf126Q8N4M7 172 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 A4D1N5 150 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 NDUFA7O95182 113 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 APOMO95445 188 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 IGHV3-30-3P0DP02 117 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
TRIM39-205ENST00000396551 RPL35AP18077 110 aaKnown RBP11.86□□□□□ -0.51
TRIM39-205ENST00000396551 PLAC8L1A1L4L8 177 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 H3BMG7 143 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 TSPAN13O95857 204 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 CMC4P56277 68 aaPredicted RBP11.85□□□□□ -0.51
TRIM39-205ENST00000396551 KRTAP10-3P60369 221 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 NDUFA11Q86Y39 141 aa11.85□□□□□ -0.51
TRIM39-205ENST00000396551 NOP10Q9NPE3 64 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms