RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SLURP1P55000 103 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 XGP55808 180 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 Q5PR19 223 aa11.45□□□□□ -0.58
HOXA3-202ENST00000396352 H7C2G1 150 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 DEFB136Q30KP8 78 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 Q6ZUT4 128 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 CHCHD7Q9BUK0 85 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 PRRC2AP48634 2157 aaKnown RBP11.44□□□□□ -0.58
HOXA3-202ENST00000396352 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
HOXA3-202ENST00000396352 SLC25A20O43772 301 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
HOXA3-202ENST00000396352 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
HOXA3-202ENST00000396352 A0A1B0GV72 72 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 M0QXV9 152 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 FSHBP01225 129 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 Q6YL49 198 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 IGHV1-58A0A0C4DH39 117 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 C9JAW5 83 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 UBE2D4Q9Y2X8 147 aa11.43□□□□□ -0.58
HOXA3-202ENST00000396352 SPINK8P0C7L1 97 aa11.42□□□□□ -0.58
HOXA3-202ENST00000396352 PIK3CD-AS1Q5SR53 167 aa11.42□□□□□ -0.58
HOXA3-202ENST00000396352 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
HOXA3-202ENST00000396352 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
HOXA3-202ENST00000396352 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
HOXA3-202ENST00000396352 VSIG2Q96IQ7 327 aa11.41□□□□□ -0.58
HOXA3-202ENST00000396352 CKS1BP61024 79 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 ZNF415Q09FC8 603 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 BEX4Q9NWD9 120 aaPredicted RBP11.4□□□□□ -0.58
HOXA3-202ENST00000396352 SPANXCQ9NY87 97 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 CUBNO60494 3623 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 A8MZ25 164 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 TMEM61Q8N0U2 210 aa11.4□□□□□ -0.58
HOXA3-202ENST00000396352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.4□□□□□ -0.59
HOXA3-202ENST00000396352 IGKV2-29A2NJV5 120 aaPredicted RBP11.4□□□□□ -0.59
HOXA3-202ENST00000396352 NDUFA12Q9UI09 145 aa11.4□□□□□ -0.59
HOXA3-202ENST00000396352 TRBV30A0A0K0K1B3 111 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 TRIAP1O43715 76 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 Q1RN00 199 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 LINC00467Q9BRT7 94 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 CREBBPQ92793 2442 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 CR1P17927 2039 aa11.39□□□□□ -0.59
HOXA3-202ENST00000396352 ATXN8Q156A1 80 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 PIEZO1Q92508 2521 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 MIAQ16674 131 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 LINC01620Q4KN68 170 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 LINC01600Q96MT4 127 aa11.38□□□□□ -0.59
HOXA3-202ENST00000396352 AKAP9Q99996 3911 aa11.37□□□□□ -0.59
HOXA3-202ENST00000396352 POLQO75417 2590 aa11.37□□□□□ -0.59
HOXA3-202ENST00000396352 IGHV3-53P01767 116 aa11.37□□□□□ -0.59
HOXA3-202ENST00000396352 PRSS2P07478 247 aa11.37□□□□□ -0.59
HOXA3-202ENST00000396352 IGHV3-38A0A0C4DH36 116 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 BEAN1Q3B7T3 259 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 MYO18BQ8IUG5 2567 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 Q8N2B8 174 aa11.36□□□□□ -0.59
HOXA3-202ENST00000396352 Q6ZSV7 163 aa11.35□□□□□ -0.59
HOXA3-202ENST00000396352 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
HOXA3-202ENST00000396352 LINC01587Q99440 93 aa11.35□□□□□ -0.59
HOXA3-202ENST00000396352 ICOSQ9Y6W8 199 aa11.35□□□□□ -0.59
HOXA3-202ENST00000396352 PEMTQ9UBM1 199 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 NPC2P61916 151 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
HOXA3-202ENST00000396352 RS1O15537 224 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 C4orf3Q8WVX3 66 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 CENPEQ02224 2701 aa11.34□□□□□ -0.59
HOXA3-202ENST00000396352 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.33□□□□□ -0.6
HOXA3-202ENST00000396352 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
HOXA3-202ENST00000396352 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 CACNA1AO00555 2505 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 TEX15Q9BXT5 2789 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 INSP01308 110 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 RNF183Q96D59 192 aa11.33□□□□□ -0.6
HOXA3-202ENST00000396352 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
HOXA3-202ENST00000396352 TIMM17BO60830 172 aa11.32□□□□□ -0.6
HOXA3-202ENST00000396352 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
HOXA3-202ENST00000396352 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
HOXA3-202ENST00000396352 TEX49A0A1B0GTD5 131 aa11.31□□□□□ -0.6
HOXA3-202ENST00000396352 TIRAPP58753 221 aa11.31□□□□□ -0.6
HOXA3-202ENST00000396352 TMEM101Q96IK0 257 aa11.31□□□□□ -0.6
HOXA3-202ENST00000396352 DYNLRB2Q8TF09 96 aa11.31□□□□□ -0.6
HOXA3-202ENST00000396352 CITED1Q99966 193 aa11.31□□□□□ -0.6
HOXA3-202ENST00000396352 NDUFA1O15239 70 aa11.3□□□□□ -0.6
HOXA3-202ENST00000396352 COX6A2Q02221 97 aa11.3□□□□□ -0.6
HOXA3-202ENST00000396352 DAND5Q8N907 189 aa11.3□□□□□ -0.6
HOXA3-202ENST00000396352 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
HOXA3-202ENST00000396352 H7C423 109 aa11.29□□□□□ -0.6
HOXA3-202ENST00000396352 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
HOXA3-202ENST00000396352 IL17DQ8TAD2 202 aa11.29□□□□□ -0.6
HOXA3-202ENST00000396352 KHDC1LQ5JSQ8 128 aa11.29□□□□□ -0.6
HOXA3-202ENST00000396352 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms