RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 BRI3O95415 125 aa13.41□□□□□ -0.26
HERPUD2-202ENST00000396081 FAM110AQ9BQ89 295 aa13.4□□□□□ -0.26
HERPUD2-202ENST00000396081 TRGV11A0A075B6L2 103 aa13.4□□□□□ -0.26
HERPUD2-202ENST00000396081 IGHV1-58A0A0C4DH39 117 aa13.4□□□□□ -0.26
HERPUD2-202ENST00000396081 H3BT86 120 aa13.39□□□□□ -0.27
HERPUD2-202ENST00000396081 MIAQ16674 131 aa13.39□□□□□ -0.27
HERPUD2-202ENST00000396081 TMEM95Q3KNT9 176 aa13.39□□□□□ -0.27
HERPUD2-202ENST00000396081 ABCA2Q9BZC7 2435 aa13.38□□□□□ -0.27
HERPUD2-202ENST00000396081 TNFRSF18Q9Y5U5 241 aa13.38□□□□□ -0.27
HERPUD2-202ENST00000396081 K7ENP7 123 aa13.38□□□□□ -0.27
HERPUD2-202ENST00000396081 ZNF625Q96I27 306 aaPredicted RBP13.38□□□□□ -0.27
HERPUD2-202ENST00000396081 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
HERPUD2-202ENST00000396081 IGHV4-38-2P0DP08 117 aa13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 SNRPD3P62318 126 aaKnown RBP13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 IGKV2-29A2NJV5 120 aaPredicted RBP13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 LST1O00453 97 aa13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 Q9UF83 564 aa13.37□□□□□ -0.27
HERPUD2-202ENST00000396081 PRM2P04554 102 aa13.36□□□□□ -0.27
HERPUD2-202ENST00000396081 MRPS36P82909 103 aaKnown RBP13.36□□□□□ -0.27
HERPUD2-202ENST00000396081 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
HERPUD2-202ENST00000396081 IGHG2P01859 326 aa13.36□□□□□ -0.27
HERPUD2-202ENST00000396081 VSIG2Q96IQ7 327 aa13.36□□□□□ -0.27
HERPUD2-202ENST00000396081 IGHV3-38A0A0C4DH36 116 aa13.35□□□□□ -0.27
HERPUD2-202ENST00000396081 SPANXDQ9BXN6 97 aa13.35□□□□□ -0.27
HERPUD2-202ENST00000396081 SPANXCQ9NY87 97 aa13.35□□□□□ -0.27
HERPUD2-202ENST00000396081 FAM236AA0A1B0GUQ0 79 aa13.33□□□□□ -0.28
HERPUD2-202ENST00000396081 FAM236BA0A1B0GV22 79 aa13.33□□□□□ -0.28
HERPUD2-202ENST00000396081 FAM104AQ969W3 186 aa13.33□□□□□ -0.28
HERPUD2-202ENST00000396081 YAE1D1Q9NRH1 226 aa13.33□□□□□ -0.28
HERPUD2-202ENST00000396081 H3BUA1 57 aa13.32□□□□□ -0.28
HERPUD2-202ENST00000396081 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
HERPUD2-202ENST00000396081 TMEM101Q96IK0 257 aa13.32□□□□□ -0.28
HERPUD2-202ENST00000396081 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
HERPUD2-202ENST00000396081 LINC01600Q96MT4 127 aa13.31□□□□□ -0.28
HERPUD2-202ENST00000396081 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
HERPUD2-202ENST00000396081 MRPL23Q16540 153 aaKnown RBP13.3□□□□□ -0.28
HERPUD2-202ENST00000396081 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
HERPUD2-202ENST00000396081 K7EMT4 169 aa13.29□□□□□ -0.28
HERPUD2-202ENST00000396081 TINCRA0A1B0GVN0 87 aa13.29□□□□□ -0.28
HERPUD2-202ENST00000396081 SYNJ2BPP57105 145 aa13.29□□□□□ -0.28
HERPUD2-202ENST00000396081 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
HERPUD2-202ENST00000396081 FAM240AA0A1B0GVK7 77 aa13.28□□□□□ -0.28
HERPUD2-202ENST00000396081 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
HERPUD2-202ENST00000396081 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
HERPUD2-202ENST00000396081 A6NDX4 124 aa13.28□□□□□ -0.28
HERPUD2-202ENST00000396081 IGLV1-40P01703 118 aa13.28□□□□□ -0.28
HERPUD2-202ENST00000396081 IGHV4-61A0A0C4DH41 118 aa13.27□□□□□ -0.28
HERPUD2-202ENST00000396081 Q6ZSN1 163 aa13.27□□□□□ -0.28
HERPUD2-202ENST00000396081 K7EQG2 157 aa13.27□□□□□ -0.29
HERPUD2-202ENST00000396081 Q9H8V8 135 aa13.27□□□□□ -0.29
HERPUD2-202ENST00000396081 UBE2D4Q9Y2X8 147 aa13.27□□□□□ -0.29
HERPUD2-202ENST00000396081 RBMY1A1P0DJD3 496 aaKnown RBP13.26□□□□□ -0.29
HERPUD2-202ENST00000396081 RBMY1CP0DJD4 496 aa13.26□□□□□ -0.29
HERPUD2-202ENST00000396081 RBMY1FQ15415 496 aaKnown RBP13.26□□□□□ -0.29
HERPUD2-202ENST00000396081 CITED2Q99967 270 aaPredicted RBP13.26□□□□□ -0.29
HERPUD2-202ENST00000396081 CHCHD7Q9BUK0 85 aa13.26□□□□□ -0.29
HERPUD2-202ENST00000396081 TRBV7-7A0A0K0K1E9 115 aa13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 KLRB1Q12918 225 aa13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 LINC00308Q8TCZ7 52 aa13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 USP9YO00507 2555 aaPredicted RBP13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
HERPUD2-202ENST00000396081 C9orf153Q5TBE3 101 aa13.23□□□□□ -0.29
HERPUD2-202ENST00000396081 Q8N2B8 174 aa13.23□□□□□ -0.29
HERPUD2-202ENST00000396081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.23□□□□□ -0.29
HERPUD2-202ENST00000396081 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 LINC01587Q99440 93 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 CRYBG3Q68DQ2 2970 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 CHD8Q9HCK8 2581 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 COX6A2Q02221 97 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 SMCR5Q8TEV8 140 aa13.22□□□□□ -0.29
HERPUD2-202ENST00000396081 COX7A2LO14548 114 aa13.21□□□□□ -0.29
HERPUD2-202ENST00000396081 DEFB131AP59861 70 aa13.21□□□□□ -0.29
HERPUD2-202ENST00000396081 NDUFA1O15239 70 aa13.21□□□□□ -0.3
HERPUD2-202ENST00000396081 BAALC-AS2P0C853 105 aa13.21□□□□□ -0.3
HERPUD2-202ENST00000396081 TRAV13-1A0A0B4J241 112 aa13.2□□□□□ -0.3
HERPUD2-202ENST00000396081 VPS13CQ709C8 3753 aa13.2□□□□□ -0.3
HERPUD2-202ENST00000396081 TIMM17BO60830 172 aa13.19□□□□□ -0.3
HERPUD2-202ENST00000396081 NDUFA7O95182 113 aa13.19□□□□□ -0.3
HERPUD2-202ENST00000396081 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
HERPUD2-202ENST00000396081 ACYP1P07311 99 aa13.19□□□□□ -0.3
HERPUD2-202ENST00000396081 TMEM126AQ9H061 195 aa13.19□□□□□ -0.3
HERPUD2-202ENST00000396081 MYO9AB2RTY4 2548 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 PSMB8P28062 276 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 GAGE2AQ6NT46 116 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 HOXD3P31249 432 aaPredicted RBP13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 SOSTDC1Q6X4U4 206 aa13.18□□□□□ -0.3
HERPUD2-202ENST00000396081 CFHR3Q02985 330 aa13.17□□□□□ -0.3
HERPUD2-202ENST00000396081 Q9HAA7 133 aa13.17□□□□□ -0.3
HERPUD2-202ENST00000396081 C19orf84I3L1E1 186 aa13.17□□□□□ -0.3
HERPUD2-202ENST00000396081 RS1O15537 224 aa13.17□□□□□ -0.3
HERPUD2-202ENST00000396081 LINC00643Q86TS7 51 aa13.17□□□□□ -0.3
HERPUD2-202ENST00000396081 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
HERPUD2-202ENST00000396081 WNK1Q9H4A3 2382 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms