RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 C8orf49Q96NF6 230 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 MRPL35Q9NZE8 188 aaKnown RBP2.97□□□□□ -1.93
HERC4-204ENST00000395198 IL36RNQ9UBH0 155 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 FAM223BA6NKX1 122 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 LYNX1G3V0Z9 82 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 LYNX1P0DP58 116 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 ZNF22P17026 224 aaPredicted RBP2.97□□□□□ -1.93
HERC4-204ENST00000395198 CYP2G1PQ6ZSU1 146 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 LINC00643Q86TS7 51 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 WFDC6Q9BQY6 131 aa2.97□□□□□ -1.93
HERC4-204ENST00000395198 IGKV1D-42A0A075B6H8 117 aa2.96□□□□□ -1.93
HERC4-204ENST00000395198 APELAP0DMC3 54 aa2.96□□□□□ -1.93
HERC4-204ENST00000395198 TSPEAR-AS2P59090 65 aa2.96□□□□□ -1.93
HERC4-204ENST00000395198 MTORP42345 2549 aa2.96□□□□□ -1.93
HERC4-204ENST00000395198 PHLDA3Q9Y5J5 127 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 LHFPL6Q9Y693 200 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 TEX49A0A1B0GTD5 131 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 IQCF6A8MYZ5 107 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 IGLV2-23P01705 113 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 RNASE1P07998 156 aaKnown RBP2.96□□□□□ -1.94
HERC4-204ENST00000395198 IAPPP10997 89 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 CKS2P33552 79 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 PIGYQ3MUY2 71 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 C20orf203Q8NBC4 194 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 NDUFA12Q9UI09 145 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 TRAV13-2A0A0B4J235 113 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 TMEM170BQ5T4T1 132 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 ZFAND2AQ8N6M9 145 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 SORL1Q92673 2214 aa2.96□□□□□ -1.94
HERC4-204ENST00000395198 TRAV1-2A0A0B4J238 106 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 IGHV3-16A0A0C4DH30 117 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 CHCHD1Q96BP2 118 aaKnown RBP2.95□□□□□ -1.94
HERC4-204ENST00000395198 NMES1Q9C002 83 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 HTTP42858 3142 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 PRR14LQ5THK1 2151 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 MUC4Q99102 2169 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 TNCP24821 2201 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 ESRGQ1W209 222 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 MIR17HGQ75NE6 70 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 C11orf1Q9H5F2 150 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 NCOA6Q14686 2063 aaPredicted RBP2.95□□□□□ -1.94
HERC4-204ENST00000395198 SLC25A20O43772 301 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 MRPL51Q4U2R6 128 aaKnown RBP2.95□□□□□ -1.94
HERC4-204ENST00000395198 C10orf128Q5T292 105 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 RPRMLQ8N4K4 120 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 Q8N814 137 aa2.95□□□□□ -1.94
HERC4-204ENST00000395198 IGKV2D-26A0A0A0MRZ7 120 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 SFTA2Q6UW10 78 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 FN1P02751 2386 aaKnown RBP2.94□□□□□ -1.94
HERC4-204ENST00000395198 IGHV1-24A0A0C4DH33 117 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 LY6HO94772 140 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 CRIP2P52943 208 aaPredicted RBP2.94□□□□□ -1.94
HERC4-204ENST00000395198 MAPK1IP1LQ8NDC0 245 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 RETNLBQ9BQ08 111 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 IGLV3-32A0A0A0MS00 114 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 SPINK9Q5DT21 86 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 IGHV7-81A0A0B4J1V7 117 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 LOC107984156A0A0G2JMH3 177 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 C19orf84I3L1E1 186 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 K7EMI3 77 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 TFF1P04155 84 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 SUPT4H1P63272 117 aaKnown RBP2.94□□□□□ -1.94
HERC4-204ENST00000395198 ARL17AQ8IVW1 177 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 NUP37Q8NFH4 326 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 LEAP2Q969E1 77 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 DNAH12Q6ZR08 3092 aa2.94□□□□□ -1.94
HERC4-204ENST00000395198 TRAV40A0A0B4J280 105 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 IGHV1-18A0A0C4DH31 117 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 ACYP1P07311 99 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 LINC00476Q8WZB0 136 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 PSENENQ9NZ42 101 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 ASPMQ8IZT6 3477 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 A0A0C4DFX4 3053 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 HTN1P15515 57 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 LINC01547P58512 204 aaPredicted RBP2.93□□□□□ -1.94
HERC4-204ENST00000395198 PRB3Q04118 309 aaPredicted RBP2.93□□□□□ -1.94
HERC4-204ENST00000395198 PRR4Q16378 134 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 LYPD2Q6UXB3 125 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 BSNQ9UPA5 3926 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 IGHV3-21A0A0B4J1V1 117 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 PPYP01298 95 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 NPYP01303 97 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 RPL27AP46776 148 aaKnown RBP2.93□□□□□ -1.94
HERC4-204ENST00000395198 SSBP1Q04837 148 aaKnown RBP2.93□□□□□ -1.94
HERC4-204ENST00000395198 CYYR1Q96J86 154 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 DPM3Q9P2X0 92 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 FREM1Q5H8C1 2179 aa2.93□□□□□ -1.94
HERC4-204ENST00000395198 IGKV3D-15A0A087WSY6 115 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 MYMXA0A1B0GTQ4 84 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 H3BVH4 76 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 LYZP61626 148 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 ZNF525Q8N782 197 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 ZNF414Q96IQ9 312 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 PRRC2AP48634 2157 aaKnown RBP2.92□□□□□ -1.94
HERC4-204ENST00000395198 KRTAP23-1A1A580 65 aa2.92□□□□□ -1.94
HERC4-204ENST00000395198 MGST1P10620 155 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms