RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
PTBP1-204ENST00000394601 ASIPP42127 132 aa11.52□□□□□ -0.57
PTBP1-204ENST00000394601 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
PTBP1-204ENST00000394601 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
PTBP1-204ENST00000394601 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
PTBP1-204ENST00000394601 PMVKQ15126 192 aa11.51□□□□□ -0.57
PTBP1-204ENST00000394601 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
PTBP1-204ENST00000394601 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-204ENST00000394601 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-204ENST00000394601 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
PTBP1-204ENST00000394601 POLQO75417 2590 aa11.51□□□□□ -0.57
PTBP1-204ENST00000394601 USP9YO00507 2555 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-204ENST00000394601 ATXN8Q156A1 80 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 TRAV12-1A0A0B4J245 112 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 CRYGDP07320 174 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 CR1P17927 2039 aa11.5□□□□□ -0.57
PTBP1-204ENST00000394601 IGHV3-73A0A0B4J1V6 119 aa11.49□□□□□ -0.57
PTBP1-204ENST00000394601 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
PTBP1-204ENST00000394601 TRIAP1O43715 76 aa11.49□□□□□ -0.57
PTBP1-204ENST00000394601 FSHBP01225 129 aa11.49□□□□□ -0.57
PTBP1-204ENST00000394601 A0A0J9YXV3 536 aa11.48□□□□□ -0.57
PTBP1-204ENST00000394601 COX6B1P14854 86 aa11.48□□□□□ -0.57
PTBP1-204ENST00000394601 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 A0A087WW49 117 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
PTBP1-204ENST00000394601 TSHBP01222 138 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 DSCR9P59020 149 aa11.47□□□□□ -0.57
PTBP1-204ENST00000394601 ACACBO00763 2458 aa11.46□□□□□ -0.57
PTBP1-204ENST00000394601 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
PTBP1-204ENST00000394601 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.58
PTBP1-204ENST00000394601 TMEM89A2RUT3 159 aa11.46□□□□□ -0.58
PTBP1-204ENST00000394601 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.58
PTBP1-204ENST00000394601 ZFYVE26Q68DK2 2539 aa11.45□□□□□ -0.58
PTBP1-204ENST00000394601 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
PTBP1-204ENST00000394601 PTPN13Q12923 2485 aa11.45□□□□□ -0.58
PTBP1-204ENST00000394601 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
PTBP1-204ENST00000394601 POLR2KP53803 58 aaKnown RBP11.44□□□□□ -0.58
PTBP1-204ENST00000394601 C9orf85Q96MD7 179 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 A0A0J9YX75 114 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 MYO9AB2RTY4 2548 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 ZNF462Q96JM2 2506 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 K7EQG2 157 aa11.44□□□□□ -0.58
PTBP1-204ENST00000394601 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
PTBP1-204ENST00000394601 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
PTBP1-204ENST00000394601 COX6CP09669 75 aa11.43□□□□□ -0.58
PTBP1-204ENST00000394601 RNF152Q8N8N0 203 aa11.43□□□□□ -0.58
PTBP1-204ENST00000394601 SUMO4Q6EEV6 95 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 APCP25054 2843 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 LRRK2Q5S007 2527 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 IGIPA6NJ69 53 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 LGALS9O00182 355 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
PTBP1-204ENST00000394601 J3QLI3 93 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 M0R2P5 195 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 TMEM263Q8WUH6 116 aaKnown RBP11.41□□□□□ -0.58
PTBP1-204ENST00000394601 BBC3Q96PG8 261 aaPredicted RBP11.41□□□□□ -0.58
PTBP1-204ENST00000394601 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 H7C423 109 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 PRB1P04280 392 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 Q6YL49 198 aa11.41□□□□□ -0.58
PTBP1-204ENST00000394601 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
PTBP1-204ENST00000394601 KRTAP10-9P60411 292 aa11.39□□□□□ -0.59
PTBP1-204ENST00000394601 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
PTBP1-204ENST00000394601 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
PTBP1-204ENST00000394601 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
PTBP1-204ENST00000394601 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
PTBP1-204ENST00000394601 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
PTBP1-204ENST00000394601 ICOSQ9Y6W8 199 aa11.39□□□□□ -0.59
PTBP1-204ENST00000394601 ANK3Q12955 4377 aaKnown RBP11.39□□□□□ -0.59
PTBP1-204ENST00000394601 TRAV13-1A0A0B4J241 112 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 TRBV27A0A0K0K1C4 114 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 LINC01619G3V211 115 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 PPP1R17O96001 155 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 HOXD3P31249 432 aaPredicted RBP11.38□□□□□ -0.59
PTBP1-204ENST00000394601 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 TRBV6-5A0A0K0K1A5 114 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 HERVK_113P63121 156 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 SBSPONQ8IVN8 264 aa11.38□□□□□ -0.59
PTBP1-204ENST00000394601 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 ABCA12Q86UK0 2595 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 M0QY20 66 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 ZNF876PQ49A33 203 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
PTBP1-204ENST00000394601 NF1P21359 2839 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 PAPPA-AS1Q5QFB9 102 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 GAGE2AQ6NT46 116 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 P0DMU3 169 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 FAM231AP0DMU4 169 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 FAM231CP0DMU5 169 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
PTBP1-204ENST00000394601 A0A0J9YXY3 114 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms