RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 IGHV3-30-3P0DP02 117 aa12.38□□□□□ -0.43
SIPA1-201ENST00000394224 CFHR3Q02985 330 aa12.38□□□□□ -0.43
SIPA1-201ENST00000394224 FBXL19-AS1Q494R0 122 aa12.38□□□□□ -0.43
SIPA1-201ENST00000394224 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
SIPA1-201ENST00000394224 IGHV1OR15-1A0A075B7D0 117 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 RHODO00212 210 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 SLURP1P55000 103 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 C2orf82Q6UX34 121 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 TRIAP1O43715 76 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 Q6ZSN1 163 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 NDUFA12Q9UI09 145 aa12.37□□□□□ -0.43
SIPA1-201ENST00000394224 IGHV3-33P01772 117 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 UBE2D3P61077 147 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 UBE2D2P62837 147 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
SIPA1-201ENST00000394224 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 GAGE2EQ4V326 116 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 GAGE2DQ9UEU5 116 aa12.36□□□□□ -0.43
SIPA1-201ENST00000394224 IGLV4-3A0A075B6K6 122 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 PPP1R17O96001 155 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 LINC01587Q99440 93 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 IGHV4OR15-8A0A075B7B6 117 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 A0A087WW49 117 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 A0A0J9YXY3 114 aa12.35□□□□□ -0.43
SIPA1-201ENST00000394224 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 I3L3M4 83 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 IGHG2P01859 326 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
SIPA1-201ENST00000394224 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
SIPA1-201ENST00000394224 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 LENEPQ9Y5L5 61 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
SIPA1-201ENST00000394224 PRSS47A8MTI9 375 aa12.33□□□□□ -0.44
SIPA1-201ENST00000394224 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
SIPA1-201ENST00000394224 USMG5Q96IX5 58 aa12.33□□□□□ -0.44
SIPA1-201ENST00000394224 KLLNB2CW77 178 aa12.33□□□□□ -0.44
SIPA1-201ENST00000394224 HOXD3P31249 432 aaPredicted RBP12.33□□□□□ -0.44
SIPA1-201ENST00000394224 SETXQ7Z333 2677 aaKnown RBP12.33□□□□□ -0.44
SIPA1-201ENST00000394224 AKAP9Q99996 3911 aa12.33□□□□□ -0.44
SIPA1-201ENST00000394224 LINC01620Q4KN68 170 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 C11orf68Q9H3H3 251 aaKnown RBP12.32□□□□□ -0.44
SIPA1-201ENST00000394224 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 A0A0J9YX75 114 aa12.32□□□□□ -0.44
SIPA1-201ENST00000394224 M0R2P5 195 aa12.31□□□□□ -0.44
SIPA1-201ENST00000394224 MSMBP08118 114 aa12.31□□□□□ -0.44
SIPA1-201ENST00000394224 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
SIPA1-201ENST00000394224 TRBV27A0A0K0K1C4 114 aa12.31□□□□□ -0.44
SIPA1-201ENST00000394224 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
SIPA1-201ENST00000394224 AMELXQ99217 191 aa12.31□□□□□ -0.44
SIPA1-201ENST00000394224 CCDC179H3BU77 68 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 CDKN2A-AS1Q9UH64 79 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 POM121L12Q8N7R1 296 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
SIPA1-201ENST00000394224 APCP25054 2843 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 NBL1P41271 181 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
SIPA1-201ENST00000394224 LEPROTO15243 131 aa12.29□□□□□ -0.44
SIPA1-201ENST00000394224 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
SIPA1-201ENST00000394224 ATXN8Q156A1 80 aa12.28□□□□□ -0.44
SIPA1-201ENST00000394224 A6NDX4 124 aa12.28□□□□□ -0.44
SIPA1-201ENST00000394224 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
SIPA1-201ENST00000394224 USP24Q9UPU5 2620 aa12.27□□□□□ -0.45
SIPA1-201ENST00000394224 TRGV1A0A0A0MS02 117 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 ICOSQ9Y6W8 199 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 H3BMM0 161 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 UBE2WQ96B02 151 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
SIPA1-201ENST00000394224 LGALS9O00182 355 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 PRB1P04280 392 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 Q9H8V8 135 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 COX6CP09669 75 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 TMEM61Q8N0U2 210 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 FAM19A4Q96LR4 140 aa12.25□□□□□ -0.45
SIPA1-201ENST00000394224 NXPH4O95158 308 aa12.24□□□□□ -0.45
SIPA1-201ENST00000394224 DYNLRB2Q8TF09 96 aa12.24□□□□□ -0.45
SIPA1-201ENST00000394224 COX6A2Q02221 97 aa12.24□□□□□ -0.45
SIPA1-201ENST00000394224 Q9HAA7 133 aa12.24□□□□□ -0.45
SIPA1-201ENST00000394224 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 C10orf105Q8TEF2 133 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 GAGE4Q13068 117 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 GAGE5Q13069 117 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.23□□□□□ -0.45
SIPA1-201ENST00000394224 SMIM20Q8N5G0 67 aa12.23□□□□□ -0.45
SIPA1-201ENST00000394224 C19orf54Q5BKX5 351 aa12.22□□□□□ -0.45
SIPA1-201ENST00000394224 C9orf85Q96MD7 179 aa12.22□□□□□ -0.45
SIPA1-201ENST00000394224 H7C423 109 aa12.22□□□□□ -0.45
SIPA1-201ENST00000394224 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms