RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
CDH16-202ENST00000394055 CD28P10747 220 aa10.77□□□□□ -0.69
CDH16-202ENST00000394055 PROK1P58294 105 aa10.77□□□□□ -0.69
CDH16-202ENST00000394055 GAGE4Q13068 117 aa10.77□□□□□ -0.69
CDH16-202ENST00000394055 PDZD2O15018 2839 aa10.77□□□□□ -0.69
CDH16-202ENST00000394055 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 IGIPA6NJ69 53 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 NHLRC4P0CG21 123 aaPredicted RBP10.76□□□□□ -0.69
CDH16-202ENST00000394055 P0DMU3 169 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 TRBV6-5A0A0K0K1A5 114 aa10.76□□□□□ -0.69
CDH16-202ENST00000394055 TRPT1Q86TN4 253 aaKnown RBP10.76□□□□□ -0.69
CDH16-202ENST00000394055 OPRPNQ99935 248 aaPredicted RBP10.76□□□□□ -0.69
CDH16-202ENST00000394055 KRTAP1-1Q07627 177 aa10.75□□□□□ -0.69
CDH16-202ENST00000394055 ATP6V0E2Q8NHE4 81 aa10.75□□□□□ -0.69
CDH16-202ENST00000394055 NOTCH3Q9UM47 2321 aa10.74□□□□□ -0.69
CDH16-202ENST00000394055 C11orf86A6NJI1 115 aa10.74□□□□□ -0.69
CDH16-202ENST00000394055 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
CDH16-202ENST00000394055 PRADC1Q9BSG0 188 aa10.74□□□□□ -0.69
CDH16-202ENST00000394055 LINC01587Q99440 93 aa10.74□□□□□ -0.69
CDH16-202ENST00000394055 CITED2Q99967 270 aaPredicted RBP10.74□□□□□ -0.69
CDH16-202ENST00000394055 IGLV4-69A0A075B6H9 119 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 A8MTW9 85 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 CEND1Q8N111 149 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 CCL24O00175 119 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 PMVKQ15126 192 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 XCL2Q9UBD3 114 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 Q9UF83 564 aa10.73□□□□□ -0.69
CDH16-202ENST00000394055 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 SPXQ9BT56 116 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 IGHV3OR16-12A0A075B7B8 117 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
CDH16-202ENST00000394055 JMJD1CQ15652 2540 aa10.72□□□□□ -0.69
CDH16-202ENST00000394055 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 HIST1H4GQ99525 98 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 J3QKU1 62 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 M0QXV9 152 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 TMEM141Q96I45 108 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
CDH16-202ENST00000394055 UNC79Q9P2D8 2635 aa10.71□□□□□ -0.7
CDH16-202ENST00000394055 I3L3M4 83 aa10.71□□□□□ -0.7
CDH16-202ENST00000394055 ZNF415Q09FC8 603 aa10.71□□□□□ -0.7
CDH16-202ENST00000394055 TRBV20-1A0A075B6N2 111 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 M0R2P5 195 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 RRN3P1Q2M238 152 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 TMEM170BQ5T4T1 132 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 Q6ZSN1 163 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 FASNP49327 2511 aaKnown RBP10.7□□□□□ -0.7
CDH16-202ENST00000394055 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 ZNF815PA8K554 130 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 NDUFV3P56181 108 aaKnown RBP10.7□□□□□ -0.7
CDH16-202ENST00000394055 NSUN5P1Q3KNT7 163 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 LINC01006Q8NI28 216 aa10.7□□□□□ -0.7
CDH16-202ENST00000394055 INSP01308 110 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 SMCPP49901 116 aaPredicted RBP10.69□□□□□ -0.7
CDH16-202ENST00000394055 RHOHQ15669 191 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
CDH16-202ENST00000394055 STHQ8IWL8 128 aa10.68□□□□□ -0.7
CDH16-202ENST00000394055 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
CDH16-202ENST00000394055 C11orf72Q8NBR9 251 aa10.68□□□□□ -0.7
CDH16-202ENST00000394055 PPDPFLQ8WWR9 84 aa10.68□□□□□ -0.7
CDH16-202ENST00000394055 VCX2Q9H322 139 aa10.68□□□□□ -0.7
CDH16-202ENST00000394055 A8MWV9 139 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 RHODO00212 210 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 SCGB1D4Q6XE38 83 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 GAGE2BQ13066 116 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 GAGE2EQ4V326 116 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 SMR3AQ99954 134 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 GAGE2DQ9UEU5 116 aa10.67□□□□□ -0.7
CDH16-202ENST00000394055 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
CDH16-202ENST00000394055 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 ANK3Q12955 4377 aaKnown RBP10.66□□□□□ -0.7
CDH16-202ENST00000394055 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 PTH2Q96A98 100 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 HERVK_113P61574 105 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
CDH16-202ENST00000394055 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.7
CDH16-202ENST00000394055 KMT2BQ9UMN6 2715 aaPredicted RBP10.65□□□□□ -0.7
CDH16-202ENST00000394055 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
CDH16-202ENST00000394055 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
CDH16-202ENST00000394055 WFDC10AQ9H1F0 79 aa10.65□□□□□ -0.7
CDH16-202ENST00000394055 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.71
CDH16-202ENST00000394055 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.71
CDH16-202ENST00000394055 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.71
CDH16-202ENST00000394055 NOTCH2Q04721 2471 aa10.65□□□□□ -0.71
CDH16-202ENST00000394055 HECTD1Q9ULT8 2610 aa10.65□□□□□ -0.71
CDH16-202ENST00000394055 IGLV4-3A0A075B6K6 122 aa10.64□□□□□ -0.71
CDH16-202ENST00000394055 IFITM1P13164 125 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms