RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ICOSQ9Y6W8 199 aa10.78□□□□□ -0.68
SFXN3-202ENST00000393459 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.68
SFXN3-202ENST00000393459 IGHV3OR16-12A0A075B7B8 117 aa10.77□□□□□ -0.68
SFXN3-202ENST00000393459 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.68
SFXN3-202ENST00000393459 NDUFA7O95182 113 aa10.77□□□□□ -0.68
SFXN3-202ENST00000393459 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
SFXN3-202ENST00000393459 H3BUX3 64 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 C5orf56Q8N8D9 126 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 KIF25-AS1Q9Y6Z4 181 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 CFAP46Q8IYW2 2715 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 NPFFO15130 113 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 NXPH4O95158 308 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 LY6DQ14210 128 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 OVOL1O14753 267 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
SFXN3-202ENST00000393459 IGLV4-3A0A075B6K6 122 aa10.75□□□□□ -0.69
SFXN3-202ENST00000393459 OOSP1A8MZH6 123 aa10.75□□□□□ -0.69
SFXN3-202ENST00000393459 LINC01619G3V211 115 aa10.75□□□□□ -0.69
SFXN3-202ENST00000393459 I3L3M4 83 aa10.75□□□□□ -0.69
SFXN3-202ENST00000393459 IGHV4-38-2P0DP08 117 aa10.75□□□□□ -0.69
SFXN3-202ENST00000393459 SIRPDQ9H106 197 aa10.74□□□□□ -0.69
SFXN3-202ENST00000393459 TRBV10-2A0A0K0K1G8 114 aa10.74□□□□□ -0.69
SFXN3-202ENST00000393459 LEPROTO15243 131 aa10.74□□□□□ -0.69
SFXN3-202ENST00000393459 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
SFXN3-202ENST00000393459 TEX15Q9BXT5 2789 aa10.74□□□□□ -0.69
SFXN3-202ENST00000393459 M0QY20 66 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 COX6CP09669 75 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 Q9HAA7 133 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 LGALS9O00182 355 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 ID1P41134 155 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 SBSPONQ8IVN8 264 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
SFXN3-202ENST00000393459 C20orf203Q8NBC4 194 aa10.72□□□□□ -0.69
SFXN3-202ENST00000393459 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
SFXN3-202ENST00000393459 MINOS1-NBL1R4GNA1 71 aa10.72□□□□□ -0.69
SFXN3-202ENST00000393459 TRAV13-1A0A0B4J241 112 aa10.71□□□□□ -0.69
SFXN3-202ENST00000393459 U3KQE9 123 aa10.71□□□□□ -0.69
SFXN3-202ENST00000393459 IGHV3-53P01767 116 aa10.71□□□□□ -0.7
SFXN3-202ENST00000393459 TMEM190Q8WZ59 177 aa10.71□□□□□ -0.7
SFXN3-202ENST00000393459 GCN1Q92616 2671 aaKnown RBP10.71□□□□□ -0.7
SFXN3-202ENST00000393459 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.7□□□□□ -0.7
SFXN3-202ENST00000393459 IGHV1-69DA0A0B4J2H0 117 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 SOCS3O14543 225 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 PPP1R17O96001 155 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 DGAT2L7PQ6IED9 249 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 BRI3O95415 125 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 EBI3Q14213 229 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 CDKN2A-AS1Q9UH64 79 aa10.7□□□□□ -0.7
SFXN3-202ENST00000393459 TRBV27A0A0K0K1C4 114 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 DEFB136Q30KP8 78 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 KHDC1LQ5JSQ8 128 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 Q8N2B8 174 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 ANKRD17O75179 2603 aaKnown RBP10.69□□□□□ -0.7
SFXN3-202ENST00000393459 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 C11orf71Q6IPW1 123 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 Q6ZSN1 163 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 TNFRSF18Q9Y5U5 241 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 ACANP16112 2415 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 DAZ1Q9NQZ3 744 aaKnown RBP10.69□□□□□ -0.7
SFXN3-202ENST00000393459 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
SFXN3-202ENST00000393459 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
SFXN3-202ENST00000393459 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
SFXN3-202ENST00000393459 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
SFXN3-202ENST00000393459 LINC00694P0DN24 101 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 PIK3CD-AS1Q5SR53 167 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 C9orf153Q5TBE3 101 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 A0A087WW49 117 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 CFHR3Q02985 330 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 Q9H8V8 135 aa10.67□□□□□ -0.7
SFXN3-202ENST00000393459 NDUFA4O00483 81 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 RHOHQ15669 191 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 EDA2RQ9HAV5 297 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
SFXN3-202ENST00000393459 HIVEP2P31629 2446 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
SFXN3-202ENST00000393459 SMCR5Q8TEV8 140 aa10.66□□□□□ -0.7
SFXN3-202ENST00000393459 APCP25054 2843 aa10.65□□□□□ -0.7
SFXN3-202ENST00000393459 LITAFQ99732 161 aa10.65□□□□□ -0.7
SFXN3-202ENST00000393459 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.7
SFXN3-202ENST00000393459 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
SFXN3-202ENST00000393459 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 COX6A2Q02221 97 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 KLLNB2CW77 178 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 M0QXV9 152 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
SFXN3-202ENST00000393459 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 LMO4P61968 165 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
SFXN3-202ENST00000393459 NRGNQ92686 78 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 GNLYP22749 145 aa10.64□□□□□ -0.71
SFXN3-202ENST00000393459 C11orf44Q8N8P7 122 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms