RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
USP44-202ENST00000393091 CSDC2Q9Y534 153 aaKnown RBP9.06□□□□□ -0.96
USP44-202ENST00000393091 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
USP44-202ENST00000393091 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
USP44-202ENST00000393091 FRAS1Q86XX4 4008 aa9.05□□□□□ -0.96
USP44-202ENST00000393091 SSTP61278 116 aa9.05□□□□□ -0.96
USP44-202ENST00000393091 Q6ZR54 194 aa9.05□□□□□ -0.96
USP44-202ENST00000393091 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
USP44-202ENST00000393091 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
USP44-202ENST00000393091 MAP1LC3AQ9H492 121 aa9.04□□□□□ -0.96
USP44-202ENST00000393091 TRAV8-6A0A0B4J262 113 aa9.04□□□□□ -0.96
USP44-202ENST00000393091 Q0VG73 95 aa9.04□□□□□ -0.96
USP44-202ENST00000393091 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 COTL1Q14019 142 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 TRBV25-1A0A075B6N4 114 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 ZNF25P17030 456 aaPredicted RBP9.03□□□□□ -0.96
USP44-202ENST00000393091 PMCHP20382 165 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 LAGE3Q14657 143 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 NIT1Q86X76 327 aa9.03□□□□□ -0.96
USP44-202ENST00000393091 G0S2P27469 103 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 FABP9Q0Z7S8 132 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 C18orf32Q8TCD1 76 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 PYGO1Q9Y3Y4 419 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 DNAH2Q9P225 4427 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 SIVA1O15304 175 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 Q9H8V8 135 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 RYR2Q92736 4967 aa9.01□□□□□ -0.97
USP44-202ENST00000393091 SMAGPQ0VAQ4 97 aa9□□□□□ -0.97
USP44-202ENST00000393091 TMEM243Q9BU79 118 aa9□□□□□ -0.97
USP44-202ENST00000393091 ORMDL2Q53FV1 153 aa9□□□□□ -0.97
USP44-202ENST00000393091 C10orf126Q8N4M7 172 aa9□□□□□ -0.97
USP44-202ENST00000393091 SCO1O75880 301 aa9□□□□□ -0.97
USP44-202ENST00000393091 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
USP44-202ENST00000393091 PRR34Q9NV39 138 aa9□□□□□ -0.97
USP44-202ENST00000393091 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
USP44-202ENST00000393091 IBA57-AS1B1ANH7 110 aa8.99□□□□□ -0.97
USP44-202ENST00000393091 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
USP44-202ENST00000393091 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
USP44-202ENST00000393091 CHCHD1Q96BP2 118 aaKnown RBP8.99□□□□□ -0.97
USP44-202ENST00000393091 NBDYA0A0U1RRE5 68 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 WFDC10BQ8IUB3 73 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 AMTP48728 403 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 RAB5BP61020 215 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 KMT2AQ03164 3969 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 TRGC2P03986 189 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 COA6Q5JTJ3 125 aaKnown RBP8.98□□□□□ -0.97
USP44-202ENST00000393091 TMEM18Q96B42 140 aa8.98□□□□□ -0.97
USP44-202ENST00000393091 UBE2DNLQ8IWF7 75 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 KIAA1644Q3SXP7 199 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 FAM104AQ969W3 186 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 UBE2D4Q9Y2X8 147 aa8.97□□□□□ -0.97
USP44-202ENST00000393091 TOMM6Q96B49 74 aa8.96□□□□□ -0.97
USP44-202ENST00000393091 HYDINQ4G0P3 5121 aa8.96□□□□□ -0.98
USP44-202ENST00000393091 CCL25O15444 150 aa8.96□□□□□ -0.98
USP44-202ENST00000393091 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
USP44-202ENST00000393091 PDZD11Q5EBL8 140 aa8.95□□□□□ -0.98
USP44-202ENST00000393091 PACRGQ96M98 296 aaPredicted RBP8.95□□□□□ -0.98
USP44-202ENST00000393091 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
USP44-202ENST00000393091 LINC00614P0C842 121 aa8.94□□□□□ -0.98
USP44-202ENST00000393091 FCER1GP30273 86 aa8.94□□□□□ -0.98
USP44-202ENST00000393091 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
USP44-202ENST00000393091 RBX1P62877 108 aa8.94□□□□□ -0.98
USP44-202ENST00000393091 Q6ZRN7 208 aaPredicted RBP8.94□□□□□ -0.98
USP44-202ENST00000393091 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
USP44-202ENST00000393091 KRTAP1-5Q9BYS1 174 aa8.93□□□□□ -0.98
USP44-202ENST00000393091 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
USP44-202ENST00000393091 NFE4Q86UQ8 179 aa8.93□□□□□ -0.98
USP44-202ENST00000393091 CDC42SE2Q9NRR3 84 aa8.93□□□□□ -0.98
USP44-202ENST00000393091 A0A096LNJ9 63 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 LY6G6CO95867 125 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 FGF6P10767 208 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 LINC00310P59036 64 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 MPV17L2Q567V2 206 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 PRSS3P2Q8NHM4 247 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 TMEM141Q96I45 108 aa8.92□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
USP44-202ENST00000393091 KRTAP26-1Q6PEX3 210 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 TRAV8-4A0A0B4J246 113 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 UBE2L6O14933 153 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 OR5A1Q8NGJ0 315 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 AMELXQ99217 191 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 CHCHD5Q9BSY4 110 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
USP44-202ENST00000393091 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms