RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 TRBV30A0A0K0K1B3 111 aa11.15□□□□□ -0.62
SHTN1-204ENST00000392903 H3BMM0 161 aa11.15□□□□□ -0.62
SHTN1-204ENST00000392903 OVOL1O14753 267 aa11.15□□□□□ -0.62
SHTN1-204ENST00000392903 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.62
SHTN1-204ENST00000392903 UBE2WQ96B02 151 aa11.15□□□□□ -0.62
SHTN1-204ENST00000392903 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.63
SHTN1-204ENST00000392903 TMEM223A0PJW6 202 aa11.15□□□□□ -0.63
SHTN1-204ENST00000392903 LGALS9O00182 355 aa11.15□□□□□ -0.63
SHTN1-204ENST00000392903 MUC4Q99102 2169 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 CCDC168Q8NDH2 2452 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 APRG1Q8IVJ8 170 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 FAM19A4Q96LR4 140 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 NBPF19A0A087WUL8 3843 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 A0A0J9YX75 114 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 GNRH2O43555 120 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 Q1RN00 199 aa11.14□□□□□ -0.63
SHTN1-204ENST00000392903 CR1P17927 2039 aa11.13□□□□□ -0.63
SHTN1-204ENST00000392903 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
SHTN1-204ENST00000392903 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
SHTN1-204ENST00000392903 DUX5Q96PT3 197 aa11.13□□□□□ -0.63
SHTN1-204ENST00000392903 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
SHTN1-204ENST00000392903 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
SHTN1-204ENST00000392903 M0R2P5 195 aa11.12□□□□□ -0.63
SHTN1-204ENST00000392903 TRIAP1O43715 76 aa11.12□□□□□ -0.63
SHTN1-204ENST00000392903 NF1P21359 2839 aa11.12□□□□□ -0.63
SHTN1-204ENST00000392903 J3QLI3 93 aa11.11□□□□□ -0.63
SHTN1-204ENST00000392903 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
SHTN1-204ENST00000392903 TRBV6-5A0A0K0K1A5 114 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 FAM240AA0A1B0GVK7 77 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 IGHV4-31P0DP07 118 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 ITPR3Q14573 2671 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 H3BT86 120 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 DCANP1Q8TF63 244 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 VPREB3Q9UKI3 123 aa11.1□□□□□ -0.63
SHTN1-204ENST00000392903 K7EMT4 169 aa11.09□□□□□ -0.63
SHTN1-204ENST00000392903 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
SHTN1-204ENST00000392903 TENM4Q6N022 2769 aa11.09□□□□□ -0.63
SHTN1-204ENST00000392903 H7C423 109 aa11.09□□□□□ -0.63
SHTN1-204ENST00000392903 ZNF22P17026 224 aaPredicted RBP11.09□□□□□ -0.63
SHTN1-204ENST00000392903 SYNJ2BPP57105 145 aa11.09□□□□□ -0.63
SHTN1-204ENST00000392903 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 DEFB121Q5J5C9 76 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 JPT2Q9H910 190 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 CHD6Q8TD26 2715 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 SETD2Q9BYW2 2564 aaPredicted RBP11.08□□□□□ -0.64
SHTN1-204ENST00000392903 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 Q6YL49 198 aa11.08□□□□□ -0.64
SHTN1-204ENST00000392903 CUBNO60494 3623 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 ID1P41134 155 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 RHOHQ15669 191 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 ICOSQ9Y6W8 199 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 TRBV7-7A0A0K0K1E9 115 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 DEFB113Q30KQ7 82 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 LITAFQ99732 161 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
SHTN1-204ENST00000392903 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
SHTN1-204ENST00000392903 A0A087WWL8 130 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 F5H697 171 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 Q96MF0 132 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 TMEM126AQ9H061 195 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 FLNAP21333 2647 aaKnown RBP11.06□□□□□ -0.64
SHTN1-204ENST00000392903 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 ZNF702PQ9H963 129 aa11.06□□□□□ -0.64
SHTN1-204ENST00000392903 ZNF56Q15929 161 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 HIST2H2BDQ6DRA6 164 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 FSHBP01225 129 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 COX6CP09669 75 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
SHTN1-204ENST00000392903 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
SHTN1-204ENST00000392903 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
SHTN1-204ENST00000392903 KLLNB2CW77 178 aa11.04□□□□□ -0.64
SHTN1-204ENST00000392903 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
SHTN1-204ENST00000392903 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
SHTN1-204ENST00000392903 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
SHTN1-204ENST00000392903 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 LST1O00453 97 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 IGHV3-30-3P0DP02 117 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 CHCHD5Q9BSY4 110 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 ACANP16112 2415 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 TMEM89A2RUT3 159 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 LINC01587Q99440 93 aa11.03□□□□□ -0.64
SHTN1-204ENST00000392903 M0QY20 66 aa11.02□□□□□ -0.65
SHTN1-204ENST00000392903 DUX3Q96PT4 197 aa11.02□□□□□ -0.65
SHTN1-204ENST00000392903 WNK1Q9H4A3 2382 aa11.02□□□□□ -0.65
SHTN1-204ENST00000392903 IGLV4-3A0A075B6K6 122 aa11.01□□□□□ -0.65
SHTN1-204ENST00000392903 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
SHTN1-204ENST00000392903 PRSS2P07478 247 aa11.01□□□□□ -0.65
SHTN1-204ENST00000392903 HIST2H2BCQ6DN03 193 aa11.01□□□□□ -0.65
SHTN1-204ENST00000392903 TMEM101Q96IK0 257 aa11.01□□□□□ -0.65
SHTN1-204ENST00000392903 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
SHTN1-204ENST00000392903 TRGV11A0A075B6L2 103 aa11□□□□□ -0.65
SHTN1-204ENST00000392903 SLURP1P55000 103 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms