RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 IGLV4-69A0A075B6H9 119 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 PLAC8L1A1L4L8 177 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 NPSP0C0P6 89 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 HSD52Q0P140 79 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 RRN3P1Q2M238 152 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 Q6ZTI0 123 aa14.41□□□□□ -0.1
PTPN11-202ENST00000392597 C3orf56Q8N813 242 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 MDFIQ99750 246 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 OVOL2Q9BRP0 275 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 TRBV10-1A0A0K0K1A3 114 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 CIDEAO60543 219 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 NOP10Q9NPE3 64 aaKnown RBP14.4□□□□□ -0.1
PTPN11-202ENST00000392597 Q9UF83 564 aa14.4□□□□□ -0.1
PTPN11-202ENST00000392597 VWFP04275 2813 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 E9PLD3 99 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 CRYBA4P53673 196 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 SEC11AP67812 179 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 ZNF479Q96JC4 524 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 ANK2Q01484 3957 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 C11orf86A6NJI1 115 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 OR11H2Q8NH07 326 aa14.38□□□□□ -0.11
PTPN11-202ENST00000392597 COTL1Q14019 142 aa14.37□□□□□ -0.11
PTPN11-202ENST00000392597 SHISA2Q6UWI4 295 aa14.37□□□□□ -0.11
PTPN11-202ENST00000392597 IGLV4-3A0A075B6K6 122 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 TRBV25-1A0A075B6N4 114 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 K7EQD1 137 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 NFE4Q86UQ8 179 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 CHCHD7Q9BUK0 85 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 TTTY13Q9BZ97 58 aa14.36□□□□□ -0.11
PTPN11-202ENST00000392597 TRBV7-3A0A075B6L6 115 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 TRAV8-6A0A0B4J262 113 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 TRRAPQ9Y4A5 3859 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 HERVK_113P61574 105 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 SPATA3Q8NHX4 192 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 VCX2Q9H322 139 aa14.35□□□□□ -0.11
PTPN11-202ENST00000392597 ZNF25P17030 456 aaPredicted RBP14.34□□□□□ -0.11
PTPN11-202ENST00000392597 RPL36AP83881 106 aaKnown RBP14.34□□□□□ -0.11
PTPN11-202ENST00000392597 ORAOV1Q8WV07 137 aa14.34□□□□□ -0.11
PTPN11-202ENST00000392597 RPL36ALQ969Q0 106 aaKnown RBP14.34□□□□□ -0.11
PTPN11-202ENST00000392597 ZMAT5Q9UDW3 170 aaKnown RBP14.34□□□□□ -0.11
PTPN11-202ENST00000392597 COX11Q9Y6N1 276 aa14.34□□□□□ -0.11
PTPN11-202ENST00000392597 MAPKAPK5-AS1Q8N8E1 139 aa14.33□□□□□ -0.11
PTPN11-202ENST00000392597 PRADC1Q9BSG0 188 aa14.33□□□□□ -0.11
PTPN11-202ENST00000392597 CHAC1Q9BUX1 264 aa14.33□□□□□ -0.11
PTPN11-202ENST00000392597 GAGE1Q13065 139 aa14.33□□□□□ -0.12
PTPN11-202ENST00000392597 WFDC9Q8NEX5 89 aa14.33□□□□□ -0.12
PTPN11-202ENST00000392597 AMELXQ99217 191 aa14.33□□□□□ -0.12
PTPN11-202ENST00000392597 OPRPNQ99935 248 aaPredicted RBP14.33□□□□□ -0.12
PTPN11-202ENST00000392597 TRGV2A0A075B6R0 118 aa14.32□□□□□ -0.12
PTPN11-202ENST00000392597 ZNRF2Q8NHG8 242 aa14.32□□□□□ -0.12
PTPN11-202ENST00000392597 MYMXA0A1B0GTQ4 84 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 GAGE12BA1L429 117 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 A6NDN8 102 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 GAGE7O76087 117 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 DAZ4Q86SG3 579 aaKnown RBP14.31□□□□□ -0.12
PTPN11-202ENST00000392597 LINC00469Q8N7U9 141 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 SLC25A29Q8N8R3 303 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 PHLDA1Q8WV24 401 aaPredicted RBP14.31□□□□□ -0.12
PTPN11-202ENST00000392597 DAZ3Q9NR90 486 aaKnown RBP14.31□□□□□ -0.12
PTPN11-202ENST00000392597 WIPF1O43516 503 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 EMP1P54849 157 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 FAM104AQ969W3 186 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 UBE2D4Q9Y2X8 147 aa14.31□□□□□ -0.12
PTPN11-202ENST00000392597 IGHV3-38A0A0C4DH36 116 aa14.3□□□□□ -0.12
PTPN11-202ENST00000392597 SMIM9A6NGZ8 99 aa14.3□□□□□ -0.12
PTPN11-202ENST00000392597 TAX1BP3O14907 124 aa14.3□□□□□ -0.12
PTPN11-202ENST00000392597 TAL2Q16559 108 aa14.3□□□□□ -0.12
PTPN11-202ENST00000392597 TIMM21Q9BVV7 248 aa14.3□□□□□ -0.12
PTPN11-202ENST00000392597 TRBV6-4A0A1B0GX49 114 aa14.29□□□□□ -0.12
PTPN11-202ENST00000392597 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
PTPN11-202ENST00000392597 UBE2D3P61077 147 aa14.29□□□□□ -0.12
PTPN11-202ENST00000392597 UBE2D2P62837 147 aa14.29□□□□□ -0.12
PTPN11-202ENST00000392597 TMEM170BQ5T4T1 132 aa14.29□□□□□ -0.12
PTPN11-202ENST00000392597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.27□□□□□ -0.13
PTPN11-202ENST00000392597 IGKV2-29A2NJV5 120 aaPredicted RBP14.27□□□□□ -0.13
PTPN11-202ENST00000392597 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.13
PTPN11-202ENST00000392597 LINC00612Q8N6U2 182 aa14.27□□□□□ -0.13
PTPN11-202ENST00000392597 TM2D2Q9BX73 214 aa14.26□□□□□ -0.13
PTPN11-202ENST00000392597 ZNF815PA8K554 130 aa14.25□□□□□ -0.13
PTPN11-202ENST00000392597 APOC4P55056 127 aa14.25□□□□□ -0.13
PTPN11-202ENST00000392597 X6R8D5 127 aa14.25□□□□□ -0.13
PTPN11-202ENST00000392597 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
PTPN11-202ENST00000392597 ZNF22P17026 224 aaPredicted RBP14.25□□□□□ -0.13
PTPN11-202ENST00000392597 CEMP1Q6PRD7 247 aaPredicted RBP14.25□□□□□ -0.13
PTPN11-202ENST00000392597 GTSF1LQ9H1H1 148 aa14.25□□□□□ -0.13
PTPN11-202ENST00000392597 TRGV4A0A0C4DH28 118 aa14.24□□□□□ -0.13
PTPN11-202ENST00000392597 A0A0J9YXV3 536 aa14.24□□□□□ -0.13
PTPN11-202ENST00000392597 Q6ZVH6 145 aa14.24□□□□□ -0.13
PTPN11-202ENST00000392597 CEND1Q8N111 149 aa14.24□□□□□ -0.13
PTPN11-202ENST00000392597 GAGE12JA6NER3 117 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 H3BRM9 83 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 GCSHP23434 173 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 SMAGPQ0VAQ4 97 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 GAGE4Q13068 117 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 GAGE5Q13069 117 aa14.23□□□□□ -0.13
PTPN11-202ENST00000392597 GAGE13Q4V321 117 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms