RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 ZFHX3Q15911 3703 aa12.14□□□□□ -0.47
TRA2A-202ENST00000392502 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
TRA2A-202ENST00000392502 A0A087WW49 117 aa12.14□□□□□ -0.47
TRA2A-202ENST00000392502 VCYO14598 125 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 IGHG2P01859 326 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 EDN2P20800 178 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 NDPQ00604 133 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 VMO1Q7Z5L0 202 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 MRPL53Q96EL3 112 aaKnown RBP12.13□□□□□ -0.47
TRA2A-202ENST00000392502 TMEM243Q9BU79 118 aa12.13□□□□□ -0.47
TRA2A-202ENST00000392502 PRSS2P07478 247 aa12.12□□□□□ -0.47
TRA2A-202ENST00000392502 NPBQ8NG41 125 aa12.12□□□□□ -0.47
TRA2A-202ENST00000392502 RPL39LQ96EH5 51 aaKnown RBP12.12□□□□□ -0.47
TRA2A-202ENST00000392502 VSIG2Q96IQ7 327 aa12.12□□□□□ -0.47
TRA2A-202ENST00000392502 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 FHL2Q14192 279 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 RNF182Q8N6D2 247 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 ZFAND3Q9H8U3 227 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 BCE1O60756 84 aa12.11□□□□□ -0.47
TRA2A-202ENST00000392502 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 BAALC-AS2P0C853 105 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 LENEPQ9Y5L5 61 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 EPG5Q9HCE0 2579 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 NSUN5P1Q3KNT7 163 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 C6orf226Q5I0X4 101 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
TRA2A-202ENST00000392502 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
TRA2A-202ENST00000392502 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
TRA2A-202ENST00000392502 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
TRA2A-202ENST00000392502 C9orf139Q6ZV77 190 aa12.09□□□□□ -0.47
TRA2A-202ENST00000392502 C16orf95Q9H693 158 aa12.09□□□□□ -0.47
TRA2A-202ENST00000392502 DNAL4O96015 105 aa12.08□□□□□ -0.48
TRA2A-202ENST00000392502 CELSR1Q9NYQ6 3014 aa12.08□□□□□ -0.48
TRA2A-202ENST00000392502 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.48
TRA2A-202ENST00000392502 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 ATP5EP2Q5VTU8 51 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 C19orf84I3L1E1 186 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
TRA2A-202ENST00000392502 S100A7L2Q5SY68 101 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 OVOL2Q9BRP0 275 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 SMAD5-AS1Q9Y6J3 95 aa12.07□□□□□ -0.48
TRA2A-202ENST00000392502 IGLV11-55A0A075B6I3 123 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 Q8N6K4 173 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 IGHV3-30-3P0DP02 117 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 MINOS1Q5TGZ0 78 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 C9orf47Q6ZRZ4 202 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 SIRPDQ9H106 197 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 MINOS1-NBL1R4GNA1 71 aa12.06□□□□□ -0.48
TRA2A-202ENST00000392502 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
TRA2A-202ENST00000392502 SPTAN1Q13813 2472 aaKnown RBP12.05□□□□□ -0.48
TRA2A-202ENST00000392502 ZFYVE26Q68DK2 2539 aa12.04□□□□□ -0.48
TRA2A-202ENST00000392502 TRBV27A0A0K0K1C4 114 aa12.04□□□□□ -0.48
TRA2A-202ENST00000392502 MGPP08493 103 aa12.04□□□□□ -0.48
TRA2A-202ENST00000392502 ATP5EP56381 51 aaPredicted RBP12.04□□□□□ -0.48
TRA2A-202ENST00000392502 ITLN2Q8WWU7 325 aaPredicted RBP12.04□□□□□ -0.48
TRA2A-202ENST00000392502 PHLDA3Q9Y5J5 127 aa12.04□□□□□ -0.48
TRA2A-202ENST00000392502 CFAP46Q8IYW2 2715 aa12.03□□□□□ -0.48
TRA2A-202ENST00000392502 IGHV7-81A0A0B4J1V7 117 aa12.03□□□□□ -0.48
TRA2A-202ENST00000392502 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
TRA2A-202ENST00000392502 GNLYP22749 145 aa12.03□□□□□ -0.48
TRA2A-202ENST00000392502 MAP1AP78559 2803 aaPredicted RBP12.02□□□□□ -0.48
TRA2A-202ENST00000392502 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.48
TRA2A-202ENST00000392502 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.48
TRA2A-202ENST00000392502 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.48
TRA2A-202ENST00000392502 NDUFA12Q9UI09 145 aa12.02□□□□□ -0.48
TRA2A-202ENST00000392502 FAM223BA6NKX1 122 aa12.02□□□□□ -0.49
TRA2A-202ENST00000392502 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
TRA2A-202ENST00000392502 Q8N9W7 124 aa12.02□□□□□ -0.49
TRA2A-202ENST00000392502 IGHV3-35A0A0C4DH35 117 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 PRAC2D3DTV9 90 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 XCL1P47992 114 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 RPL39P62891 51 aaKnown RBP12.01□□□□□ -0.49
TRA2A-202ENST00000392502 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 BBC3Q96PG8 261 aaPredicted RBP12.01□□□□□ -0.49
TRA2A-202ENST00000392502 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 LMO4P61968 165 aa12.01□□□□□ -0.49
TRA2A-202ENST00000392502 CIRBPQ14011 172 aaKnown RBP12.01□□□□□ -0.49
TRA2A-202ENST00000392502 NXPH4O95158 308 aa12□□□□□ -0.49
TRA2A-202ENST00000392502 LAMTOR3Q9UHA4 124 aa12□□□□□ -0.49
TRA2A-202ENST00000392502 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 TRBV10-3A0A0K0K1G6 114 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 GHRHP01286 108 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 SAA4P35542 130 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 C22orf24Q9Y442 160 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 IGKV3D-7A0A0C4DH55 119 aa11.99□□□□□ -0.49
TRA2A-202ENST00000392502 CTSGP08311 255 aa11.98□□□□□ -0.49
TRA2A-202ENST00000392502 FP248Q71RG6 208 aaPredicted RBP11.98□□□□□ -0.49
TRA2A-202ENST00000392502 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
TRA2A-202ENST00000392502 FAM223AQ8IWN6 122 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms