RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
CCDC50-201ENST00000392455 MYO9AB2RTY4 2548 aa11.36□□□□□ -0.59
CCDC50-201ENST00000392455 LY6G6EA0A0G2JKS1 128 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 PMAIP1Q13794 54 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 U3KQA8 63 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 FXYD2P54710 66 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 MYCNOSP40205 109 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 K7EN84 100 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 ODF1Q14990 250 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 PTH2Q96A98 100 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 LRRK2Q5S007 2527 aa11.35□□□□□ -0.59
CCDC50-201ENST00000392455 IGHV4-59P01825 116 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 COX17Q14061 63 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 IGLV1-44P01699 117 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 NRACQ8N912 160 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 Q8N9W7 124 aa11.34□□□□□ -0.59
CCDC50-201ENST00000392455 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
CCDC50-201ENST00000392455 UBE2D3P61077 147 aa11.33□□□□□ -0.6
CCDC50-201ENST00000392455 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
CCDC50-201ENST00000392455 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
CCDC50-201ENST00000392455 HIGD2AQ9BW72 106 aa11.33□□□□□ -0.6
CCDC50-201ENST00000392455 A0A087WZ39 114 aa11.32□□□□□ -0.6
CCDC50-201ENST00000392455 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
CCDC50-201ENST00000392455 RAI1Q7Z5J4 1906 aaPredicted RBP11.32□□□□□ -0.6
CCDC50-201ENST00000392455 CDPF1Q6NVV7 123 aa11.32□□□□□ -0.6
CCDC50-201ENST00000392455 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
CCDC50-201ENST00000392455 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
CCDC50-201ENST00000392455 F8P00451 2351 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 SLURP1P55000 103 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 C2orf70A6NJV1 201 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 Q6ZVQ6 151 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 CCKP06307 115 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 HILS1P60008 231 aa11.31□□□□□ -0.6
CCDC50-201ENST00000392455 SPRY2O43597 315 aa11.3□□□□□ -0.6
CCDC50-201ENST00000392455 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
CCDC50-201ENST00000392455 FAM215AQ9Y5M1 114 aa11.3□□□□□ -0.6
CCDC50-201ENST00000392455 IGLV11-55A0A075B6I3 123 aa11.3□□□□□ -0.6
CCDC50-201ENST00000392455 MLST8Q9BVC4 326 aa11.3□□□□□ -0.6
CCDC50-201ENST00000392455 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 DAND5Q8N907 189 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 ARTNQ5T4W7 220 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 ZFYVE26Q68DK2 2539 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
CCDC50-201ENST00000392455 COX7CP15954 63 aa11.28□□□□□ -0.6
CCDC50-201ENST00000392455 GRNP28799 593 aaKnown RBP11.28□□□□□ -0.6
CCDC50-201ENST00000392455 CRYGDP07320 174 aa11.28□□□□□ -0.6
CCDC50-201ENST00000392455 WFDC10AQ9H1F0 79 aa11.28□□□□□ -0.6
CCDC50-201ENST00000392455 REG3AQ06141 175 aa11.28□□□□□ -0.6
CCDC50-201ENST00000392455 DEFB113Q30KQ7 82 aa11.28□□□□□ -0.6
CCDC50-201ENST00000392455 PRSS33Q8NF86 280 aa11.27□□□□□ -0.6
CCDC50-201ENST00000392455 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.6
CCDC50-201ENST00000392455 RPL39P62891 51 aaKnown RBP11.26□□□□□ -0.61
CCDC50-201ENST00000392455 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
CCDC50-201ENST00000392455 IGHV4-38-2P0DP08 117 aa11.26□□□□□ -0.61
CCDC50-201ENST00000392455 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
CCDC50-201ENST00000392455 TMEM223A0PJW6 202 aa11.25□□□□□ -0.61
CCDC50-201ENST00000392455 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
CCDC50-201ENST00000392455 I3L2K1 104 aa11.25□□□□□ -0.61
CCDC50-201ENST00000392455 C1orf147Q96MC9 270 aaPredicted RBP11.25□□□□□ -0.61
CCDC50-201ENST00000392455 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
CCDC50-201ENST00000392455 TRAV7A0A075B6U4 112 aa11.24□□□□□ -0.61
CCDC50-201ENST00000392455 ACANP16112 2415 aa11.24□□□□□ -0.61
CCDC50-201ENST00000392455 WT1P19544 449 aaPredicted RBP11.24□□□□□ -0.61
CCDC50-201ENST00000392455 SPRNQ5BIV9 151 aa11.24□□□□□ -0.61
CCDC50-201ENST00000392455 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
CCDC50-201ENST00000392455 MIFP14174 115 aa11.23□□□□□ -0.61
CCDC50-201ENST00000392455 CTSZQ9UBR2 303 aa11.23□□□□□ -0.61
CCDC50-201ENST00000392455 RSPO1Q2MKA7 263 aaPredicted RBP11.23□□□□□ -0.61
CCDC50-201ENST00000392455 K7EIM0 57 aa11.23□□□□□ -0.61
CCDC50-201ENST00000392455 IGHV4-30-2A0A087WSY4 118 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 DEFB135Q30KP9 77 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 LYPD6Q86Y78 171 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 C1orf158Q8N1D5 194 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 AJUBAQ96IF1 538 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 PIP4P1Q86T03 277 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.22□□□□□ -0.61
CCDC50-201ENST00000392455 RITA1Q96K30 269 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
CCDC50-201ENST00000392455 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
CCDC50-201ENST00000392455 IGKV2-24A0A0C4DH68 120 aa11.21□□□□□ -0.61
CCDC50-201ENST00000392455 Q6Q795 121 aa11.21□□□□□ -0.61
CCDC50-201ENST00000392455 NOTCH2Q04721 2471 aa11.21□□□□□ -0.62
CCDC50-201ENST00000392455 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.62
CCDC50-201ENST00000392455 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.62
CCDC50-201ENST00000392455 CPAMD8Q8IZJ3 1885 aa11.21□□□□□ -0.62
CCDC50-201ENST00000392455 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
CCDC50-201ENST00000392455 M0R378 163 aa11.2□□□□□ -0.62
CCDC50-201ENST00000392455 CTSGP08311 255 aa11.2□□□□□ -0.62
CCDC50-201ENST00000392455 CHCHD10Q8WYQ3 142 aaPredicted RBP11.19□□□□□ -0.62
CCDC50-201ENST00000392455 SLX1AQ9BQ83 275 aa11.19□□□□□ -0.62
CCDC50-201ENST00000392455 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms