RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PROK1P58294 105 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 C10orf105Q8TEF2 133 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 MUC6Q6W4X9 2439 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 LINC01619G3V211 115 aa12.75□□□□□ -0.37
TRAF3IP1-202ENST00000391993 A0A087WVE0 104 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 HIVEP3Q5T1R4 2406 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 NPBQ8NG41 125 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 PKIGQ9Y2B9 76 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 F8W735 103 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 ADAMTSL4-AS1Q5T5F5 129 aa12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 RAI1Q7Z5J4 1906 aaPredicted RBP12.74□□□□□ -0.37
TRAF3IP1-202ENST00000391993 HAMPP81172 84 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 ATOX1O00244 68 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 TSHBP01222 138 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 CDKN2A-AS1Q9UH64 79 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 IGIPA6NJ69 53 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 SOCS3O14543 225 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 COX6B1P14854 86 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 COL4A2P08572 1712 aa12.73□□□□□ -0.37
TRAF3IP1-202ENST00000391993 SRSF2Q01130 221 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 IGLV4-3A0A075B6K6 122 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 ZNF462Q96JM2 2506 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 IGHV1-58A0A0C4DH39 117 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 ACYP1P07311 99 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 PIK3CD-AS1Q5SR53 167 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 BPESC1Q9GZL8 116 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 MINOS1-NBL1R4GNA1 71 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 MIAQ16674 131 aa12.72□□□□□ -0.37
TRAF3IP1-202ENST00000391993 DEFB131AP59861 70 aa12.71□□□□□ -0.37
TRAF3IP1-202ENST00000391993 C11orf44Q8N8P7 122 aa12.71□□□□□ -0.37
TRAF3IP1-202ENST00000391993 DNAJC30Q96LL9 226 aa12.71□□□□□ -0.37
TRAF3IP1-202ENST00000391993 NAV2Q8IVL1 2488 aa12.71□□□□□ -0.38
TRAF3IP1-202ENST00000391993 SLPIP03973 132 aa12.71□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.38
TRAF3IP1-202ENST00000391993 CFHR3Q02985 330 aa12.71□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.38
TRAF3IP1-202ENST00000391993 SPTBN4Q9H254 2564 aa12.7□□□□□ -0.38
TRAF3IP1-202ENST00000391993 C20orf197Q8N268 126 aa12.7□□□□□ -0.38
TRAF3IP1-202ENST00000391993 POM121L12Q8N7R1 296 aa12.7□□□□□ -0.38
TRAF3IP1-202ENST00000391993 LST1O00453 97 aa12.7□□□□□ -0.38
TRAF3IP1-202ENST00000391993 Q6Q795 121 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 LENEPQ9Y5L5 61 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 LECT2O14960 151 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1A1P0DJD3 496 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1CP0DJD4 496 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 TMEM243Q9BU79 118 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 ZFYVE26Q68DK2 2539 aa12.69□□□□□ -0.38
TRAF3IP1-202ENST00000391993 BLCAPP62952 87 aa12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 POLR2KP53803 58 aaKnown RBP12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 GPHB5Q86YW7 130 aa12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 MRAPQ8TCY5 172 aa12.68□□□□□ -0.38
TRAF3IP1-202ENST00000391993 XCL2Q9UBD3 114 aa12.67□□□□□ -0.38
TRAF3IP1-202ENST00000391993 TRGV2A0A075B6R0 118 aa12.67□□□□□ -0.38
TRAF3IP1-202ENST00000391993 ZFP36P26651 326 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP1-202ENST00000391993 TIRAPP58753 221 aa12.67□□□□□ -0.38
TRAF3IP1-202ENST00000391993 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
TRAF3IP1-202ENST00000391993 A0A0U1RQV1 116 aa12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 F5H768 121 aa12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBM3P98179 157 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 RBMY1FQ15415 496 aaKnown RBP12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 NDUFA4O00483 81 aa12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 COX7CP15954 63 aa12.66□□□□□ -0.38
TRAF3IP1-202ENST00000391993 ZFHX4Q86UP3 3567 aa12.65□□□□□ -0.38
TRAF3IP1-202ENST00000391993 S100A7L2Q5SY68 101 aa12.65□□□□□ -0.39
TRAF3IP1-202ENST00000391993 C6orf226Q5I0X4 101 aa12.64□□□□□ -0.39
TRAF3IP1-202ENST00000391993 ABCA12Q86UK0 2595 aa12.64□□□□□ -0.39
TRAF3IP1-202ENST00000391993 COX7A2LO14548 114 aa12.64□□□□□ -0.39
TRAF3IP1-202ENST00000391993 NCR3O14931 201 aa12.64□□□□□ -0.39
TRAF3IP1-202ENST00000391993 KIR2DL5BQ8NHK3 375 aa12.64□□□□□ -0.39
TRAF3IP1-202ENST00000391993 M0QY20 66 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 GHRHP01286 108 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 FAM223BA6NKX1 122 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 EDN2P20800 178 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 FAM223AQ8IWN6 122 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 LY6LH3BQJ8 138 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 MALP21145 153 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 VSIG2Q96IQ7 327 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 PIMREGQ9BSJ6 248 aa12.63□□□□□ -0.39
TRAF3IP1-202ENST00000391993 CENPEQ02224 2701 aa12.62□□□□□ -0.39
TRAF3IP1-202ENST00000391993 WFDC11Q8NEX6 87 aa12.62□□□□□ -0.39
TRAF3IP1-202ENST00000391993 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
TRAF3IP1-202ENST00000391993 C5orf38Q86SI9 138 aa12.62□□□□□ -0.39
TRAF3IP1-202ENST00000391993 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
TRAF3IP1-202ENST00000391993 NRGNQ92686 78 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms