RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 MIAQ16674 131 aa8.42□□□□□ -1.06
GGPS1-203ENST00000391855 C1orf43Q9BWL3 253 aa8.42□□□□□ -1.06
GGPS1-203ENST00000391855 DNAH5Q8TE73 4624 aa8.42□□□□□ -1.06
GGPS1-203ENST00000391855 IGLV5-52A0A0A0MRZ9 124 aa8.41□□□□□ -1.06
GGPS1-203ENST00000391855 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
GGPS1-203ENST00000391855 TRBV6-5A0A0K0K1A5 114 aa8.41□□□□□ -1.06
GGPS1-203ENST00000391855 AMTP48728 403 aa8.41□□□□□ -1.06
GGPS1-203ENST00000391855 NUP35Q8NFH5 326 aa8.41□□□□□ -1.06
GGPS1-203ENST00000391855 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 A0A1B0GW15 77 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 UBE2L6O14933 153 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 GCSHP23434 173 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 Q8N976 141 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
GGPS1-203ENST00000391855 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 PPP1R17O96001 155 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 ENHOQ6UWT2 76 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
GGPS1-203ENST00000391855 PRR34Q9NV39 138 aa8.39□□□□□ -1.07
GGPS1-203ENST00000391855 APCSP02743 223 aa8.38□□□□□ -1.07
GGPS1-203ENST00000391855 S100A8P05109 93 aa8.38□□□□□ -1.07
GGPS1-203ENST00000391855 PNRC1Q12796 327 aaPredicted RBP8.38□□□□□ -1.07
GGPS1-203ENST00000391855 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
GGPS1-203ENST00000391855 H7C423 109 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 I3L3M4 83 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 PPP1R2P9O14990 202 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 RAB4AP20338 218 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 WFDC2Q14508 124 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 BAALCQ8WXS3 180 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 ST20Q9HBF5 79 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
GGPS1-203ENST00000391855 TRAV8-4A0A0B4J246 113 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 FUSP35637 526 aaKnown RBP eCLIP8.37□□□□□ -1.07
GGPS1-203ENST00000391855 REG3AQ06141 175 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 LINC00269Q8N2A0 174 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 TMEM70Q9BUB7 260 aa8.37□□□□□ -1.07
GGPS1-203ENST00000391855 HSPG2P98160 4391 aa8.36□□□□□ -1.07
GGPS1-203ENST00000391855 PMCHP20382 165 aa8.36□□□□□ -1.07
GGPS1-203ENST00000391855 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
GGPS1-203ENST00000391855 LECT2O14960 151 aa8.35□□□□□ -1.07
GGPS1-203ENST00000391855 FAM104BQ5XKR9 115 aa8.35□□□□□ -1.07
GGPS1-203ENST00000391855 AMMECR1LQ6DCA0 310 aa8.35□□□□□ -1.07
GGPS1-203ENST00000391855 TRBV27A0A0K0K1C4 114 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 LINC00862A6NCI5 91 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 F8W036 122 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 HLA-DQA1P01909 254 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 ZNF25P17030 456 aaPredicted RBP8.34□□□□□ -1.07
GGPS1-203ENST00000391855 CAMPP49913 170 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
GGPS1-203ENST00000391855 HBBP68871 147 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 CLPSL2Q6UWE3 100 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 ATP5L2Q7Z4Y8 100 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.07
GGPS1-203ENST00000391855 IGLV4-60A0A075B6I1 120 aa8.33□□□□□ -1.08
GGPS1-203ENST00000391855 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
GGPS1-203ENST00000391855 MT-ND4LP03901 98 aa8.33□□□□□ -1.08
GGPS1-203ENST00000391855 RPS10P46783 165 aaKnown RBP8.33□□□□□ -1.08
GGPS1-203ENST00000391855 UQCC3Q6UW78 93 aa8.33□□□□□ -1.08
GGPS1-203ENST00000391855 Q8N1X5 172 aa8.33□□□□□ -1.08
GGPS1-203ENST00000391855 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 VCYO14598 125 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 FGF6P10767 208 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 ESDP10768 282 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 SUMO2P61956 95 aaKnown RBP8.32□□□□□ -1.08
GGPS1-203ENST00000391855 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 MRPL51Q4U2R6 128 aaKnown RBP8.32□□□□□ -1.08
GGPS1-203ENST00000391855 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
GGPS1-203ENST00000391855 DEFB104AQ8WTQ1 72 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 BTF3L4Q96K17 158 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
GGPS1-203ENST00000391855 TMEM242Q9NWH2 141 aa8.32□□□□□ -1.08
GGPS1-203ENST00000391855 C7orf77A4D0Y5 90 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 TCAPO15273 167 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 GAS8-AS1O95177 125 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 TSHBP01222 138 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
GGPS1-203ENST00000391855 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 NRACQ8N912 160 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 TMEM101Q96IK0 257 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
GGPS1-203ENST00000391855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
GGPS1-203ENST00000391855 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
GGPS1-203ENST00000391855 SMKR1H3BMG3 65 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 PPBPP02775 128 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 CKS2P33552 79 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 XGP55808 180 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
GGPS1-203ENST00000391855 IFITM2Q01629 132 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 CLRN3Q8NCR9 226 aa8.3□□□□□ -1.08
GGPS1-203ENST00000391855 IGLV10-54A0A075B6I4 117 aa8.29□□□□□ -1.08
GGPS1-203ENST00000391855 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
GGPS1-203ENST00000391855 PHOX2AO14813 284 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms