RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 GAGE6Q13070 117 aa10.1□□□□□ -0.79
IGHV3-53-201ENST00000390627 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
IGHV3-53-201ENST00000390627 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 APCSP02743 223 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 CKS2P33552 79 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 RHEBQ15382 184 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 ATRAIDQ6UW56 229 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 RMI2Q96E14 147 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 TM2D2Q9BX73 214 aa10.09□□□□□ -0.79
IGHV3-53-201ENST00000390627 EREGO14944 169 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 CRPP02741 224 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 ANGP03950 147 aaKnown RBP10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 Q0VG73 95 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 NRACQ8N912 160 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 UBE2WQ96B02 151 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
IGHV3-53-201ENST00000390627 TRAV9-1A0A075B6T8 112 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 TRBV27A0A0K0K1C4 114 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 C7orf77A4D0Y5 90 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 PPBPP02775 128 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 S100PP25815 95 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 RBX1P62877 108 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 Q8N976 141 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 CLRN3Q8NCR9 226 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
IGHV3-53-201ENST00000390627 D6R8Y8 96 aa10.06□□□□□ -0.8
IGHV3-53-201ENST00000390627 VCYO14598 125 aa10.06□□□□□ -0.8
IGHV3-53-201ENST00000390627 C20orf78Q9BR46 151 aa10.06□□□□□ -0.8
IGHV3-53-201ENST00000390627 TRBV24-1A0A075B6N3 115 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 H7C423 109 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 PHOX2AO14813 284 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 TSHBP01222 138 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 RPS10P5Q9NQ39 176 aa10.05□□□□□ -0.8
IGHV3-53-201ENST00000390627 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 A0A087WTM6 91 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 APOC3P02656 99 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 FCER1GP30273 86 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 SVBPQ8N300 66 aa10.04□□□□□ -0.8
IGHV3-53-201ENST00000390627 SNAPINO95295 136 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 MIAQ16674 131 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 C1orf43Q9BWL3 253 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 PRR34Q9NV39 138 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 LAMTOR2Q9Y2Q5 125 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 PKD1P98161 4303 aa10.03□□□□□ -0.8
IGHV3-53-201ENST00000390627 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 TCAPO15273 167 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 NPYP01303 97 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 ESDP10768 282 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 PKHD1P08F94 4074 aa10.02□□□□□ -0.81
IGHV3-53-201ENST00000390627 IGLV4-60A0A075B6I1 120 aa10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 LRCOL1A6NCL2 159 aa10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 REG3AQ06141 175 aa10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
IGHV3-53-201ENST00000390627 DYNC1H1Q14204 4646 aaKnown RBP10□□□□□ -0.81
IGHV3-53-201ENST00000390627 FGF6P10767 208 aa10□□□□□ -0.81
IGHV3-53-201ENST00000390627 COX19Q49B96 90 aa10□□□□□ -0.81
IGHV3-53-201ENST00000390627 C16orf90A8MZG2 172 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 HLA-DQA1P01909 254 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
IGHV3-53-201ENST00000390627 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 KRTAP10-2P60368 255 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 CDPF1Q6NVV7 123 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 GNB1LQ9BYB4 327 aa9.98□□□□□ -0.81
IGHV3-53-201ENST00000390627 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
IGHV3-53-201ENST00000390627 Q8N814 137 aa9.97□□□□□ -0.81
IGHV3-53-201ENST00000390627 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
IGHV3-53-201ENST00000390627 MT-ND6P03923 174 aa9.96□□□□□ -0.82
IGHV3-53-201ENST00000390627 RAB5AP20339 215 aa9.96□□□□□ -0.82
IGHV3-53-201ENST00000390627 MAPKAPK5-AS1Q8N8E1 139 aa9.96□□□□□ -0.82
IGHV3-53-201ENST00000390627 BAALCQ8WXS3 180 aa9.96□□□□□ -0.82
IGHV3-53-201ENST00000390627 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
IGHV3-53-201ENST00000390627 NTN5Q8WTR8 489 aaPredicted RBP9.95□□□□□ -0.82
IGHV3-53-201ENST00000390627 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms