RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 TRAPPC2LQ9UL33 140 aa-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 GAPVD1Q14C86 1478 aa-2.28□□□□□ -2.77
TRAJ48-201ENST00000390489 NIPBLQ6KC79 2804 aaeCLIP-2.28□□□□□ -2.78
TRAJ48-201ENST00000390489 VPS13BQ7Z7G8 4022 aa-2.28□□□□□ -2.78
TRAJ48-201ENST00000390489 MUC22E2RYF6 1773 aaPredicted RBP-2.28□□□□□ -2.78
TRAJ48-201ENST00000390489 E7EQ34 232 aa-2.29□□□□□ -2.78
TRAJ48-201ENST00000390489 STX12Q86Y82 276 aa-2.29□□□□□ -2.78
TRAJ48-201ENST00000390489 AGPAT4-IT1Q9H0P7 198 aa-2.29□□□□□ -2.78
TRAJ48-201ENST00000390489 PARVGQ9HBI0 331 aa-2.29□□□□□ -2.78
TRAJ48-201ENST00000390489 XIRP1Q702N8 1843 aaKnown RBP-2.29□□□□□ -2.78
TRAJ48-201ENST00000390489 NSD3Q9BZ95 1437 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 IFNA17P01571 189 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 MT1AP04731 61 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 PIRTP0C851 137 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 SERPINB1P30740 379 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 CCL18P55774 89 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 TMEM78Q5T7P6 136 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 NDUFA12Q9UI09 145 aa-2.3□□□□□ -2.78
TRAJ48-201ENST00000390489 LYSTQ99698 3801 aa-2.31□□□□□ -2.78
TRAJ48-201ENST00000390489 LINC01545Q5VT33 79 aa-2.31□□□□□ -2.78
TRAJ48-201ENST00000390489 ZNF818PQ6ZRF7 136 aa-2.31□□□□□ -2.78
TRAJ48-201ENST00000390489 CCDC115Q96NT0 180 aa-2.31□□□□□ -2.78
TRAJ48-201ENST00000390489 CASKIN1Q8WXD9 1431 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 EIF3AQ14152 1382 aaKnown RBP-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 ANK3Q12955 4377 aaKnown RBP-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 SMIM24O75264 130 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 HLA-DRB4P13762 266 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 C9orf116Q5BN46 136 aaPredicted RBP-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 C10orf82Q8WW14 230 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 BOLA2Q9H3K6 86 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 HLA-DRB4X5D2U9 266 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 SYNMO15061 1565 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 LAMA3Q16787 3333 aa-2.32□□□□□ -2.78
TRAJ48-201ENST00000390489 KNL1Q8NG31 2342 aa-2.33□□□□□ -2.78
TRAJ48-201ENST00000390489 A0A1W2PRE2 83 aa-2.33□□□□□ -2.78
TRAJ48-201ENST00000390489 SPANXN1Q5VSR9 72 aa-2.33□□□□□ -2.78
TRAJ48-201ENST00000390489 CALML5Q9NZT1 146 aa-2.33□□□□□ -2.78
TRAJ48-201ENST00000390489 R4GMQ9 66 aa-2.33□□□□□ -2.78
TRAJ48-201ENST00000390489 A6NIN4 97 aa-2.34□□□□□ -2.78
TRAJ48-201ENST00000390489 RPL7L1Q6DKI1 246 aaKnown RBP-2.34□□□□□ -2.78
TRAJ48-201ENST00000390489 Q6JHZ5 121 aa-2.34□□□□□ -2.78
TRAJ48-201ENST00000390489 PXDNQ92626 1479 aa-2.34□□□□□ -2.78
TRAJ48-201ENST00000390489 M0R135 149 aa-2.35□□□□□ -2.79
TRAJ48-201ENST00000390489 NCR2O95944 276 aa-2.35□□□□□ -2.79
TRAJ48-201ENST00000390489 RPL7P18124 248 aaKnown RBP-2.35□□□□□ -2.79
TRAJ48-201ENST00000390489 COX17Q14061 63 aa-2.35□□□□□ -2.79
TRAJ48-201ENST00000390489 CLLU1Q5K131 121 aa-2.35□□□□□ -2.79
TRAJ48-201ENST00000390489 AKAP13Q12802 2813 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 ZZEF1O43149 2961 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 PRDM2Q13029 1718 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 MYH8P13535 1937 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 ANKRD11Q6UB99 2663 aaPredicted RBP-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 MRC1P22897 1456 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 CTXND1A0A1B0GTU2 59 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 OR9Q1Q8NGQ5 310 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 MAGOHBQ96A72 148 aaKnown RBP-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 STOML2Q9UJZ1 356 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 APOBP04114 4563 aaKnown RBP-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 TEX15Q9BXT5 2789 aa-2.36□□□□□ -2.79
TRAJ48-201ENST00000390489 DNAH11Q96DT5 4516 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 SBF2Q86WG5 1849 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 DPM2O94777 84 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 TMEM170BQ5T4T1 132 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 PPP1R2P3Q6NXS1 205 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 VSTM2AQ8TAG5 236 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 DMXL1Q9Y485 3027 aa-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.37□□□□□ -2.79
TRAJ48-201ENST00000390489 PAEPP09466 180 aa-2.38□□□□□ -2.79
TRAJ48-201ENST00000390489 DAPK1P53355 1430 aa-2.38□□□□□ -2.79
TRAJ48-201ENST00000390489 BANF2Q9H503 90 aa-2.38□□□□□ -2.79
TRAJ48-201ENST00000390489 LINC00312Q9Y6C7 94 aa-2.38□□□□□ -2.79
TRAJ48-201ENST00000390489 OVOS2A0A0G2JMS6 1433 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 PPP1R17O96001 155 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 IFNGP01579 166 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 COX8AP10176 69 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 ATPIF1Q9UII2 106 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 LSM2Q9Y333 95 aaKnown RBP-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 DNHD1Q96M86 4753 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 ERCC6Q03468 1493 aa-2.39□□□□□ -2.79
TRAJ48-201ENST00000390489 ZNF236Q9UL36 1845 aa-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 SYS1-DBNDD2H3BUS1 97 aa-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 KALRNO60229 2985 aa-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 PIPP12273 146 aaPredicted RBP-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 MNS1Q8NEH6 495 aa-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 USP9XQ93008 2570 aaPredicted RBP-2.4□□□□□ -2.79
TRAJ48-201ENST00000390489 UBE2G1P62253 170 aa-2.41□□□□□ -2.8
TRAJ48-201ENST00000390489 C9orf62Q8N4C0 152 aa-2.41□□□□□ -2.8
TRAJ48-201ENST00000390489 ROCK1Q13464 1354 aa-2.41□□□□□ -2.8
TRAJ48-201ENST00000390489 POLA1P09884 1462 aaPredicted RBP-2.41□□□□□ -2.8
TRAJ48-201ENST00000390489 ACACAQ13085 2346 aa-2.41□□□□□ -2.8
TRAJ48-201ENST00000390489 TRBV20-1A0A075B6N2 111 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 PITX3O75364 302 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 MT-ND4LP03901 98 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 TOMM20LQ6UXN7 152 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 OR8I2Q8N0Y5 310 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 MYH13Q9UKX3 1938 aa-2.42□□□□□ -2.8
TRAJ48-201ENST00000390489 ADGRB1O14514 1584 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 CCL8P80075 99 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 TMEM244Q5VVB8 128 aa-2.43□□□□□ -2.8
TRAJ48-201ENST00000390489 HOPXQ9BPY8 73 aaPredicted RBP-2.43□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms