RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 BTG2P78543 158 aa0.42□□□□□ -2.34
RNU6-40P-201ENST00000384254 SPINK8P0C7L1 97 aa0.41□□□□□ -2.34
RNU6-40P-201ENST00000384254 IGF2RP11717 2491 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 APOC2P02655 101 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 SMIM4Q8WVI0 70 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 PHLPP1O60346 1717 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 ARAP2Q8WZ64 1704 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 POLQO75417 2590 aa0.4□□□□□ -2.35
RNU6-40P-201ENST00000384254 ZNF609O15014 1411 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 FOCADQ5VW36 1801 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 PATJQ8NI35 1801 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 CTXND1A0A1B0GTU2 59 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 MIF4GDA9UHW6 222 aaKnown RBP0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 SPAG11BQ08648 103 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 SPAG11AQ6PDA7 123 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 SCN3BQ9NY72 215 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 LENEPQ9Y5L5 61 aa0.39□□□□□ -2.35
RNU6-40P-201ENST00000384254 PPIP5K1Q6PFW1 1433 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 PRDM2Q13029 1718 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 DOCK2Q92608 1830 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 ZFYVE26Q68DK2 2539 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 ANKHD1Q8IWZ3 2542 aaKnown RBP0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 M0R135 149 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 SARNPP82979 210 aaKnown RBP0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 CELSR2Q9HCU4 2923 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 CACNA1AO00555 2505 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 PIEZO1Q92508 2521 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 F8P00451 2351 aa0.38□□□□□ -2.35
RNU6-40P-201ENST00000384254 IFNGP01579 166 aa0.37□□□□□ -2.35
RNU6-40P-201ENST00000384254 AKAIN1P0CW23 69 aa0.37□□□□□ -2.35
RNU6-40P-201ENST00000384254 RPL13AP3Q6NVV1 102 aa0.37□□□□□ -2.35
RNU6-40P-201ENST00000384254 OTOGQ6ZRI0 2925 aa0.37□□□□□ -2.35
RNU6-40P-201ENST00000384254 EFCAB10A6NFE3 127 aa0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 S100A3P33764 101 aa0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 PI4KAP42356 2102 aa0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 C8orf59Q8N0T1 100 aaPredicted RBP0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 V9GYH0 126 aa0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 PKD1L2Q7Z442 2459 aa0.36□□□□□ -2.35
RNU6-40P-201ENST00000384254 ANKRD17O75179 2603 aaKnown RBP0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 MRC1P22897 1456 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 DOCK1Q14185 1865 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 IFITM1P13164 125 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 CATR1Q13166 79 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 CNFNQ9BYD5 112 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 CYP4F30PQ9H0H9 118 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 MUC5ACP98088 5654 aa0.35□□□□□ -2.35
RNU6-40P-201ENST00000384254 MDN1Q9NU22 5596 aa0.34□□□□□ -2.35
RNU6-40P-201ENST00000384254 U3KQA8 63 aa0.34□□□□□ -2.36
RNU6-40P-201ENST00000384254 MBD5Q9P267 1494 aa0.34□□□□□ -2.36
RNU6-40P-201ENST00000384254 PCLOQ9Y6V0 5065 aa0.33□□□□□ -2.36
RNU6-40P-201ENST00000384254 UBR4Q5T4S7 5183 aa0.33□□□□□ -2.36
RNU6-40P-201ENST00000384254 PRO0255Q9UI72 69 aa0.33□□□□□ -2.36
RNU6-40P-201ENST00000384254 WNK3Q9BYP7 1800 aa0.33□□□□□ -2.36
RNU6-40P-201ENST00000384254 AHCTF1Q8WYP5 2266 aa0.33□□□□□ -2.36
RNU6-40P-201ENST00000384254 ROCK2O75116 1388 aaKnown RBP0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 KTN1Q86UP2 1357 aaKnown RBP0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 MUC2Q02817 5179 aa0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 LOC100130705A0A1B0GUX0 176 aa0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 PP6455Q8WZ26 134 aa0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 MGST2Q99735 147 aa0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 KMT2DO14686 5537 aa0.32□□□□□ -2.36
RNU6-40P-201ENST00000384254 SSSCA1O60232 199 aa0.31□□□□□ -2.36
RNU6-40P-201ENST00000384254 CFDP00746 253 aaPredicted RBP0.31□□□□□ -2.36
RNU6-40P-201ENST00000384254 HAMPP81172 84 aa0.31□□□□□ -2.36
RNU6-40P-201ENST00000384254 COX17Q14061 63 aa0.31□□□□□ -2.36
RNU6-40P-201ENST00000384254 SPANXDQ9BXN6 97 aa0.31□□□□□ -2.36
RNU6-40P-201ENST00000384254 KIAA1109Q2LD37 5005 aa0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 CPSF1Q10570 1443 aaKnown RBP0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 CACNA1CQ13936 2221 aa0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 DYNLRB1Q9NP97 96 aa0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 SPCS1Q9Y6A9 102 aa0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 NCOR1O75376 2440 aa0.3□□□□□ -2.36
RNU6-40P-201ENST00000384254 TRBV7-3A0A075B6L6 115 aa0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 TRAV22A0A0B4J277 110 aa0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 TMEM170BQ5T4T1 132 aa0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 MRPL54Q6P161 138 aaKnown RBP0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 C5orf38Q86SI9 138 aa0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
RNU6-40P-201ENST00000384254 SPTBN4Q9H254 2564 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 ASXL3Q9C0F0 2248 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 SNAPC5O75971 98 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 APOC3P02656 99 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 KRTAP20-1Q3LI63 56 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 COMMD6Q7Z4G1 85 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 BAGE2Q86Y30 109 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 MYOZ3Q8TDC0 251 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 NDUFA4L2Q9NRX3 87 aa0.28□□□□□ -2.36
RNU6-40P-201ENST00000384254 KMT2CQ8NEZ4 4911 aaKnown RBP0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 KDM3BQ7LBC6 1761 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 PLXNB2O15031 1838 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 F8VRH5 84 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 UQCR11O14957 56 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 TPPP2P59282 170 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 LRRC37A2A6NM11 1700 aa0.27□□□□□ -2.37
RNU6-40P-201ENST00000384254 STAB1Q9NY15 2570 aa0.26□□□□□ -2.37
RNU6-40P-201ENST00000384254 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
RNU6-40P-201ENST00000384254 LOC285095A0A1B0GVY8 99 aa0.26□□□□□ -2.37
RNU6-40P-201ENST00000384254 TSLPQ969D9 159 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms