RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DEFB4AO15263 64 aa14.28□□□□□ -0.12
CSPG5-202ENST00000383738 IGHV1OR15-1A0A075B7D0 117 aa14.27□□□□□ -0.12
CSPG5-202ENST00000383738 TEX49A0A1B0GTD5 131 aa14.27□□□□□ -0.12
CSPG5-202ENST00000383738 GATD1Q8NB37 220 aa14.27□□□□□ -0.13
CSPG5-202ENST00000383738 TEX15Q9BXT5 2789 aa14.27□□□□□ -0.13
CSPG5-202ENST00000383738 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
CSPG5-202ENST00000383738 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
CSPG5-202ENST00000383738 ASPMQ8IZT6 3477 aa14.26□□□□□ -0.13
CSPG5-202ENST00000383738 DCHS1Q96JQ0 3298 aa14.26□□□□□ -0.13
CSPG5-202ENST00000383738 PRIMA1Q86XR5 153 aa14.25□□□□□ -0.13
CSPG5-202ENST00000383738 RNF185Q96GF1 192 aa14.25□□□□□ -0.13
CSPG5-202ENST00000383738 TMEM101Q96IK0 257 aa14.25□□□□□ -0.13
CSPG5-202ENST00000383738 LRBAP50851 2863 aa14.24□□□□□ -0.13
CSPG5-202ENST00000383738 NDUFA11Q86Y39 141 aa14.24□□□□□ -0.13
CSPG5-202ENST00000383738 HHLA3Q9XRX5 114 aa14.24□□□□□ -0.13
CSPG5-202ENST00000383738 H3BUA1 57 aa14.23□□□□□ -0.13
CSPG5-202ENST00000383738 LINC01620Q4KN68 170 aa14.23□□□□□ -0.13
CSPG5-202ENST00000383738 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
CSPG5-202ENST00000383738 Q6ZSV7 163 aa14.23□□□□□ -0.13
CSPG5-202ENST00000383738 INS-IGF2F8WCM5 200 aa14.23□□□□□ -0.13
CSPG5-202ENST00000383738 LINC00158P58513 81 aa14.23□□□□□ -0.13
CSPG5-202ENST00000383738 IGLC6P0CF74 106 aa14.22□□□□□ -0.13
CSPG5-202ENST00000383738 Q6YL49 198 aa14.22□□□□□ -0.13
CSPG5-202ENST00000383738 LY6G6DO95868 133 aa14.22□□□□□ -0.13
CSPG5-202ENST00000383738 EDN2P20800 178 aa14.22□□□□□ -0.13
CSPG5-202ENST00000383738 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
CSPG5-202ENST00000383738 FAM236AA0A1B0GUQ0 79 aa14.21□□□□□ -0.13
CSPG5-202ENST00000383738 FAM236BA0A1B0GV22 79 aa14.21□□□□□ -0.13
CSPG5-202ENST00000383738 F5H768 121 aa14.21□□□□□ -0.14
CSPG5-202ENST00000383738 RPL36AP83881 106 aaKnown RBP14.2□□□□□ -0.14
CSPG5-202ENST00000383738 RPL36ALQ969Q0 106 aaKnown RBP14.2□□□□□ -0.14
CSPG5-202ENST00000383738 ZNRF2Q8NHG8 242 aa14.2□□□□□ -0.14
CSPG5-202ENST00000383738 C11orf21Q9P2W6 132 aa14.2□□□□□ -0.14
CSPG5-202ENST00000383738 STAB1Q9NY15 2570 aa14.2□□□□□ -0.14
CSPG5-202ENST00000383738 EBI3Q14213 229 aa14.2□□□□□ -0.14
CSPG5-202ENST00000383738 TRAV4A0A0B4J268 109 aa14.19□□□□□ -0.14
CSPG5-202ENST00000383738 IGHG4P01861 327 aa14.19□□□□□ -0.14
CSPG5-202ENST00000383738 Q8N1Y9 231 aa14.19□□□□□ -0.14
CSPG5-202ENST00000383738 PRM2P04554 102 aa14.19□□□□□ -0.14
CSPG5-202ENST00000383738 SUMO4Q6EEV6 95 aa14.19□□□□□ -0.14
CSPG5-202ENST00000383738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.19□□□□□ -0.14
CSPG5-202ENST00000383738 IGKV2-29A2NJV5 120 aaPredicted RBP14.19□□□□□ -0.14
CSPG5-202ENST00000383738 A0A0J9YY99 117 aa14.18□□□□□ -0.14
CSPG5-202ENST00000383738 PAX4O43316 350 aa14.18□□□□□ -0.14
CSPG5-202ENST00000383738 DPH3Q96FX2 82 aa14.18□□□□□ -0.14
CSPG5-202ENST00000383738 FSTL3O95633 263 aa14.17□□□□□ -0.14
CSPG5-202ENST00000383738 CCDC179H3BU77 68 aa14.17□□□□□ -0.14
CSPG5-202ENST00000383738 TINCRA0A1B0GVN0 87 aa14.17□□□□□ -0.14
CSPG5-202ENST00000383738 NDUFV3P56181 108 aaKnown RBP14.17□□□□□ -0.14
CSPG5-202ENST00000383738 RASL10AQ92737 203 aa14.16□□□□□ -0.14
CSPG5-202ENST00000383738 GPHB5Q86YW7 130 aa14.16□□□□□ -0.14
CSPG5-202ENST00000383738 U3KQE9 123 aa14.16□□□□□ -0.14
CSPG5-202ENST00000383738 Q8N6K4 173 aa14.16□□□□□ -0.14
CSPG5-202ENST00000383738 DMDP11532 3685 aa14.16□□□□□ -0.14
CSPG5-202ENST00000383738 TOMM6Q96B49 74 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 TMEM141Q96I45 108 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 CLPSL1A2RUU4 121 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 PFN2P35080 140 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 CFAP126Q5VTH2 177 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 SPATA25Q9BR10 227 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 MDFICQ9P1T7 246 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 SMAD5-AS1Q9Y6J3 95 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 NFE4Q86UQ8 179 aa14.15□□□□□ -0.14
CSPG5-202ENST00000383738 LRRC75A-AS1Q8N1F1 130 aa14.14□□□□□ -0.15
CSPG5-202ENST00000383738 LAMA5O15230 3695 aa14.14□□□□□ -0.15
CSPG5-202ENST00000383738 MUC4Q99102 2169 aa14.14□□□□□ -0.15
CSPG5-202ENST00000383738 A8MZ25 164 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 CLPSL2Q6UWE3 100 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 I3L3M4 83 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 CRIP2P52943 208 aaPredicted RBP14.13□□□□□ -0.15
CSPG5-202ENST00000383738 C20orf173Q96LM9 149 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 WFDC10AQ9H1F0 79 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 ITPR1Q14643 2758 aa14.13□□□□□ -0.15
CSPG5-202ENST00000383738 UBR5O95071 2799 aaPredicted RBP14.12□□□□□ -0.15
CSPG5-202ENST00000383738 DEFB135Q30KP9 77 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 U3KQK5 164 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 UNC79Q9P2D8 2635 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 ZFAND3Q9H8U3 227 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 IGKV3D-7A0A0C4DH55 119 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 CRPP02741 224 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 DAD1P61803 113 aa14.12□□□□□ -0.15
CSPG5-202ENST00000383738 TRAV12-1A0A0B4J245 112 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 CMC4P56277 68 aaPredicted RBP14.11□□□□□ -0.15
CSPG5-202ENST00000383738 MORN3Q6PF18 240 aaPredicted RBP14.11□□□□□ -0.15
CSPG5-202ENST00000383738 COL6A5A8TX70 2615 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 LINC01006Q8NI28 216 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 P0DMU3 169 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 FAM231AP0DMU4 169 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 FAM231CP0DMU5 169 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 NEXN-AS1Q8NBZ9 246 aa14.11□□□□□ -0.15
CSPG5-202ENST00000383738 PIFOQ8TCI5 191 aa14.1□□□□□ -0.15
CSPG5-202ENST00000383738 ICOSQ9Y6W8 199 aa14.1□□□□□ -0.15
CSPG5-202ENST00000383738 TRBV7-3A0A075B6L6 115 aa14.1□□□□□ -0.15
CSPG5-202ENST00000383738 Q9H8V8 135 aa14.09□□□□□ -0.15
CSPG5-202ENST00000383738 ZNF702PQ9H963 129 aa14.09□□□□□ -0.15
CSPG5-202ENST00000383738 MRPL53Q96EL3 112 aaKnown RBP14.09□□□□□ -0.15
CSPG5-202ENST00000383738 TRBV6-1A0A0K0K1D8 114 aa14.08□□□□□ -0.15
CSPG5-202ENST00000383738 NBEAL1Q6ZS30 2694 aa14.08□□□□□ -0.15
CSPG5-202ENST00000383738 LINC00482Q8N8I6 264 aa14.08□□□□□ -0.16
CSPG5-202ENST00000383738 NRACQ8N912 160 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms