RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
RPAIN-203ENST00000381209 C12orf54Q6X4T0 127 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 PCP2Q8IVA1 136 aa12.33□□□□□ -0.44
RPAIN-203ENST00000381209 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
RPAIN-203ENST00000381209 A0A1B0GV90 55 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 CRYBA4P53673 196 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 APOC4P55056 127 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 TCTAP57738 103 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 CHCHD7Q9BUK0 85 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
RPAIN-203ENST00000381209 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 TMEM97Q5BJF2 176 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
RPAIN-203ENST00000381209 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 SLC25A29Q8N8R3 303 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
RPAIN-203ENST00000381209 SPANXA1Q9NS26 97 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 X6R8D5 127 aa12.31□□□□□ -0.44
RPAIN-203ENST00000381209 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-203ENST00000381209 VCX2Q9H322 139 aa12.3□□□□□ -0.44
RPAIN-203ENST00000381209 F8P00451 2351 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 C11orf86A6NJI1 115 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 E9PLD3 99 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 UBE2D3P61077 147 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 UBE2D2P62837 147 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 BVES-AS1Q5T3Y7 98 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 HIGD1BQ9P298 99 aa12.29□□□□□ -0.44
RPAIN-203ENST00000381209 CYSRT1A8MQ03 144 aa12.28□□□□□ -0.44
RPAIN-203ENST00000381209 SHISA2Q6UWI4 295 aa12.28□□□□□ -0.44
RPAIN-203ENST00000381209 AMELXQ99217 191 aa12.28□□□□□ -0.44
RPAIN-203ENST00000381209 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-203ENST00000381209 OR11H2Q8NH07 326 aa12.27□□□□□ -0.44
RPAIN-203ENST00000381209 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.44
RPAIN-203ENST00000381209 TRGV4A0A0C4DH28 118 aa12.27□□□□□ -0.45
RPAIN-203ENST00000381209 HERVK_113P61574 105 aa12.27□□□□□ -0.45
RPAIN-203ENST00000381209 HSD52Q0P140 79 aa12.27□□□□□ -0.45
RPAIN-203ENST00000381209 TIMM21Q9BVV7 248 aa12.27□□□□□ -0.45
RPAIN-203ENST00000381209 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 EMP1P54849 157 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 GAGE1Q13065 139 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 GAGE4Q13068 117 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 GAGE5Q13069 117 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 FHL2Q14192 279 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
RPAIN-203ENST00000381209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-203ENST00000381209 TRAV8-6A0A0B4J262 113 aa12.25□□□□□ -0.45
RPAIN-203ENST00000381209 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
RPAIN-203ENST00000381209 PRADC1Q9BSG0 188 aa12.25□□□□□ -0.45
RPAIN-203ENST00000381209 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
RPAIN-203ENST00000381209 TRBV25-1A0A075B6N4 114 aa12.24□□□□□ -0.45
RPAIN-203ENST00000381209 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
RPAIN-203ENST00000381209 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
RPAIN-203ENST00000381209 MAPKAPK5-AS1Q8N8E1 139 aa12.24□□□□□ -0.45
RPAIN-203ENST00000381209 GTSF1LQ9H1H1 148 aa12.24□□□□□ -0.45
RPAIN-203ENST00000381209 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
RPAIN-203ENST00000381209 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
RPAIN-203ENST00000381209 NIPBLQ6KC79 2804 aaeCLIP12.23□□□□□ -0.45
RPAIN-203ENST00000381209 JMJD1CQ15652 2540 aa12.23□□□□□ -0.45
RPAIN-203ENST00000381209 MYMXA0A1B0GTQ4 84 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 SEC11AP67812 179 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 SMAGPQ0VAQ4 97 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 MAST4O15021 2626 aa12.22□□□□□ -0.45
RPAIN-203ENST00000381209 DEFB130BP0DP73 79 aa12.21□□□□□ -0.45
RPAIN-203ENST00000381209 DEFB130AP0DP74 79 aa12.21□□□□□ -0.45
RPAIN-203ENST00000381209 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-203ENST00000381209 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
RPAIN-203ENST00000381209 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.45
RPAIN-203ENST00000381209 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
RPAIN-203ENST00000381209 MIFP14174 115 aa12.21□□□□□ -0.46
RPAIN-203ENST00000381209 SBSPONQ8IVN8 264 aa12.21□□□□□ -0.46
RPAIN-203ENST00000381209 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.46
RPAIN-203ENST00000381209 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
RPAIN-203ENST00000381209 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
RPAIN-203ENST00000381209 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-203ENST00000381209 Q6ZUT4 128 aa12.2□□□□□ -0.46
RPAIN-203ENST00000381209 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 EGFEM1PQ0D2K5 195 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 TAL2Q16559 108 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 RNF183Q96D59 192 aa12.19□□□□□ -0.46
RPAIN-203ENST00000381209 IGHV4-28A0A0C4DH34 117 aa12.18□□□□□ -0.46
RPAIN-203ENST00000381209 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
RPAIN-203ENST00000381209 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
RPAIN-203ENST00000381209 H7C423 109 aa12.18□□□□□ -0.46
RPAIN-203ENST00000381209 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
RPAIN-203ENST00000381209 A8MZ25 164 aa12.17□□□□□ -0.46
RPAIN-203ENST00000381209 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms