RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 C10orf105Q8TEF2 133 aa7.28□□□□□ -1.24
SNX1-202ENST00000380285 IGHV4OR15-8A0A075B7B6 117 aa7.27□□□□□ -1.24
SNX1-202ENST00000380285 A0A087WW49 117 aa7.27□□□□□ -1.24
SNX1-202ENST00000380285 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.24
SNX1-202ENST00000380285 PRO0255Q9UI72 69 aa7.27□□□□□ -1.24
SNX1-202ENST00000380285 MYCNOSP40205 109 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 Q8N7P7 452 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 SIRPDQ9H106 197 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 SORL1Q92673 2214 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 ANKHD1Q8IWZ3 2542 aaKnown RBP7.27□□□□□ -1.25
SNX1-202ENST00000380285 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 LINC00322Q6ZN03 302 aaPredicted RBP7.27□□□□□ -1.25
SNX1-202ENST00000380285 NCR3O14931 201 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 NDUFA7O95182 113 aa7.27□□□□□ -1.25
SNX1-202ENST00000380285 IGHV3-33P01772 117 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 ZFAND2AQ8N6M9 145 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 IGHV4-4A0A075B6R2 117 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 IGHV4-38-2P0DP08 117 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 LOXL1Q08397 574 aaPredicted RBP7.26□□□□□ -1.25
SNX1-202ENST00000380285 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 BLCAPP62952 87 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 MUC7Q8TAX7 377 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 IGHV4-61A0A0C4DH41 118 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
SNX1-202ENST00000380285 IGLV10-54A0A075B6I4 117 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 TRAV23DV6A0A075B6W5 121 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 SPRY2O43597 315 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 DEFB136Q30KP8 78 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 ZNF80P51504 273 aaPredicted RBP7.25□□□□□ -1.25
SNX1-202ENST00000380285 DEFB113Q30KQ7 82 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 TP53TG3Q9ULZ0 132 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 MRPS36P82909 103 aaKnown RBP7.25□□□□□ -1.25
SNX1-202ENST00000380285 LINC00308Q8TCZ7 52 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 TRBV27A0A0K0K1C4 114 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 IGF1P05019 195 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
SNX1-202ENST00000380285 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
SNX1-202ENST00000380285 TRIAP1O43715 76 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 IGLV4-3A0A075B6K6 122 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 UBE2AP49459 152 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 BRWD1-AS2P59051 145 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 CFAP126Q5VTH2 177 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 MAPK1IP1LQ8NDC0 245 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 A6NDX4 124 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 C2orf91Q6ZV80 131 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 Q9HAA7 133 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 IGHV3-30P01768 117 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 IGHV3-30-5P0DP03 117 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 EXPH5Q8NEV8 1989 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 CCDC140Q96MF4 163 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 FAM110AQ9BQ89 295 aa7.24□□□□□ -1.25
SNX1-202ENST00000380285 SEM1Q6ZVN7 128 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 LRRC75A-AS1Q8N1F1 130 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 RNF185Q96GF1 192 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 EBI3Q14213 229 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 SDIM1Q6ZPB5 146 aa7.23□□□□□ -1.25
SNX1-202ENST00000380285 LYRM9A8MSI8 78 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 SPTSSBQ8NFR3 76 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 B9D2Q9BPU9 175 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 M0QXV9 152 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 CNFNQ9BYD5 112 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 LST1O00453 97 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 CRIP3Q6Q6R5 217 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 MAP6D1Q9H9H5 199 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 IGHV4-30-2A0A087WSY4 118 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 IGKV2D-26A0A0A0MRZ7 120 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 TNFRSF13BO14836 293 aaPredicted RBP7.22□□□□□ -1.25
SNX1-202ENST00000380285 COX7CP15954 63 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 UNQ9165/PRO28630Q6UXU0 137 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 KIR2DL5BQ8NHK3 375 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 COL4A4P53420 1690 aaPredicted RBP7.22□□□□□ -1.25
SNX1-202ENST00000380285 M0QY20 66 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 PTPRQQ9UMZ3 2332 aa7.22□□□□□ -1.25
SNX1-202ENST00000380285 Q6ZPA2 131 aa7.21□□□□□ -1.25
SNX1-202ENST00000380285 K7EQG2 157 aa7.21□□□□□ -1.25
SNX1-202ENST00000380285 K7ERS5 55 aa7.21□□□□□ -1.25
SNX1-202ENST00000380285 CPAMD8Q8IZJ3 1885 aa7.21□□□□□ -1.26
SNX1-202ENST00000380285 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
SNX1-202ENST00000380285 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
SNX1-202ENST00000380285 LINC00467Q9BRT7 94 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 NRACQ8N912 160 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 IGLV2-11P01706 119 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 COX17Q14061 63 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 MAPKAPK5-AS1Q8N8E1 139 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 ZFAND3Q9H8U3 227 aa7.2□□□□□ -1.26
SNX1-202ENST00000380285 GRNP28799 593 aaKnown RBP7.19□□□□□ -1.26
SNX1-202ENST00000380285 CRIP1P50238 77 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 TRBV6-4A0A1B0GX49 114 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 ENHOQ6UWT2 76 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 REG3AQ06141 175 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 H0Y9J4 135 aa7.19□□□□□ -1.26
SNX1-202ENST00000380285 J3QKU1 62 aa7.18□□□□□ -1.26
SNX1-202ENST00000380285 LY6LH3BQJ8 138 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms