RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 PSMG3-AS1Q96PY0 264 aa7.89□□□□□ -1.15
ARHGEF39-201ENST00000378387 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
ARHGEF39-201ENST00000378387 Q9H8V8 135 aa7.89□□□□□ -1.15
ARHGEF39-201ENST00000378387 PKIGQ9Y2B9 76 aa7.89□□□□□ -1.15
ARHGEF39-201ENST00000378387 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
ARHGEF39-201ENST00000378387 USP9XQ93008 2570 aaPredicted RBP7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 RHPN1-AS1Q9BWJ2 59 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 TNRC18O15417 2968 aaPredicted RBP7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 POLR2KP53803 58 aaKnown RBP7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 UNQ9165/PRO28630Q6UXU0 137 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 MIAQ16674 131 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 C20orf203Q8NBC4 194 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 SMG1Q96Q15 3661 aaKnown RBP7.88□□□□□ -1.15
ARHGEF39-201ENST00000378387 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 TIRAPP58753 221 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 DMDP11532 3685 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 POM121L12Q8N7R1 296 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 NPBQ8NG41 125 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 FAM110DQ8TAY7 271 aaPredicted RBP7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 CCDC140Q96MF4 163 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 IGLV4-3A0A075B6K6 122 aa7.87□□□□□ -1.15
ARHGEF39-201ENST00000378387 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 TRBV12-3P01733 135 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 IGHV3OR16-12A0A075B7B8 117 aa7.86□□□□□ -1.15
ARHGEF39-201ENST00000378387 KHDC1LQ5JSQ8 128 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 TRBV7-1A0A0A6YYK4 115 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 ATP5G1P05496 136 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 PRB1P04280 392 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 AMELXQ99217 191 aa7.85□□□□□ -1.15
ARHGEF39-201ENST00000378387 CRPP02741 224 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 Q8N9W7 124 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 TRAV23DV6A0A075B6W5 121 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 PROK1P58294 105 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 CDKN2A-AS1Q9UH64 79 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 LENEPQ9Y5L5 61 aa7.84□□□□□ -1.15
ARHGEF39-201ENST00000378387 EBI3Q14213 229 aa7.84□□□□□ -1.16
ARHGEF39-201ENST00000378387 C19orf54Q5BKX5 351 aa7.84□□□□□ -1.16
ARHGEF39-201ENST00000378387 C20orf197Q8N268 126 aa7.84□□□□□ -1.16
ARHGEF39-201ENST00000378387 PIMREGQ9BSJ6 248 aa7.84□□□□□ -1.16
ARHGEF39-201ENST00000378387 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 TRBV27A0A0K0K1C4 114 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 COX7A2LO14548 114 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 LINC00158P58513 81 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 WFDC9Q8NEX5 89 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 LY6LH3BQJ8 138 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 TMEM243Q9BU79 118 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 IGHV1-69P01742 117 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 SAA4P35542 130 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 PIK3CD-AS1Q5SR53 167 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 MINOS1Q5TGZ0 78 aa7.83□□□□□ -1.16
ARHGEF39-201ENST00000378387 DMXL1Q9Y485 3027 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 C11orf68Q9H3H3 251 aaKnown RBP7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 EPG5Q9HCE0 2579 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 VSIG2Q96IQ7 327 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 MUC4Q99102 2169 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 IGHV4OR15-8A0A075B7B6 117 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 A0A087WW49 117 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 M0QY20 66 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 RPL18AQ02543 176 aaKnown RBP7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 BRD3OSQ6XYD6 125 aa7.82□□□□□ -1.16
ARHGEF39-201ENST00000378387 A0A0U1RQV1 116 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 RNF223E7ERA6 249 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 PAX4O43316 350 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 SLPIP03973 132 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 COPS9Q8WXC6 57 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 SOCS3O14543 225 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 PRM2P04554 102 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 WFDC11Q8NEX6 87 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
ARHGEF39-201ENST00000378387 FN1P02751 2386 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 MALP21145 153 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 PFN2P35080 140 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 Q8N2B8 174 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 DPH3Q96FX2 82 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 CENPEQ02224 2701 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1BA6NDE4 496 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1EA6NEQ0 496 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 GHRHP01286 108 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1DP0C7P1 496 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1A1P0DJD3 496 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1CP0DJD4 496 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 RBMY1FQ15415 496 aaKnown RBP7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
ARHGEF39-201ENST00000378387 LRBAP50851 2863 aa7.79□□□□□ -1.16
ARHGEF39-201ENST00000378387 NCR3O14931 201 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms