RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 JMJD7-PLA2G4BH0Y9G9 81 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 CCKP06307 115 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 IGHV3-11P01762 117 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 ZNF491Q8N8L2 437 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 IGFL2Q6UWQ7 119 aa8.89□□□□□ -0.99
NPHP4-202ENST00000378161 TNRC6BQ9UPQ9 1833 aaKnown RBP8.88□□□□□ -0.99
NPHP4-202ENST00000378161 LINC00158P58513 81 aa8.88□□□□□ -0.99
NPHP4-202ENST00000378161 FAM222AQ5U5X8 452 aa8.88□□□□□ -0.99
NPHP4-202ENST00000378161 TOMM7Q9P0U1 55 aa8.88□□□□□ -0.99
NPHP4-202ENST00000378161 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
NPHP4-202ENST00000378161 NRACQ8N912 160 aa8.88□□□□□ -0.99
NPHP4-202ENST00000378161 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
NPHP4-202ENST00000378161 A0A087WWL8 130 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 VPREB1P12018 145 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 CGB3P0DN86 165 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 CGB7P0DN87 165 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 CDSNQ15517 529 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 TLN1Q9Y490 2541 aaKnown RBP8.87□□□□□ -0.99
NPHP4-202ENST00000378161 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 ANKHD1Q8IWZ3 2542 aaKnown RBP8.87□□□□□ -0.99
NPHP4-202ENST00000378161 A8MZ25 164 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 MIFP14174 115 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 LINC00482Q8N8I6 264 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
NPHP4-202ENST00000378161 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
NPHP4-202ENST00000378161 TRIOO75962 3097 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 PTPRSQ13332 1948 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 UBE2BP63146 152 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 PRO3102Q9H379 93 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 CTSZQ9UBR2 303 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 LRP4O75096 1905 aa8.86□□□□□ -0.99
NPHP4-202ENST00000378161 LECT2O14960 151 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 RMI2Q96E14 147 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 IGKV1-17P01599 117 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 ESRGQ1W209 222 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 Q96MF0 132 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 Q9H8V8 135 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 CSPG4Q6UVK1 2322 aa8.85□□□□□ -0.99
NPHP4-202ENST00000378161 LY6HO94772 140 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 CHD9Q3L8U1 2897 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 DCANP1Q8TF63 244 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 PTPRBP23467 1997 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 A0A0J9YX75 114 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 A0A1W2PNU3 283 aaPredicted RBP8.84□□□□□ -0.99
NPHP4-202ENST00000378161 IGHV1-69P01742 117 aa8.84□□□□□ -0.99
NPHP4-202ENST00000378161 K7ENP7 123 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 HIST2H2BCQ6DN03 193 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 HIST2H2BDQ6DRA6 164 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 IGLV2-18A0A075B6J9 118 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 LINC01546A6NGU7 62 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 E7EUB6 86 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 I3L2K1 104 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 LINC00574Q9H8X3 128 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 LINC00846Q9NV44 126 aa8.83□□□□□ -1
NPHP4-202ENST00000378161 CNFNQ9BYD5 112 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 PTPN13Q12923 2485 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 HILS1P60008 231 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 SORL1Q92673 2214 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 NCR3O14931 201 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 ARHGAP32A7KAX9 2087 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 TRBV27A0A0K0K1C4 114 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 K7EIM0 57 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 OXTP01178 125 aa8.82□□□□□ -1
NPHP4-202ENST00000378161 WT1P19544 449 aaPredicted RBP8.82□□□□□ -1
NPHP4-202ENST00000378161 MYO18BQ8IUG5 2567 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 IGLV2-23P01705 113 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 CPAMD8Q8IZJ3 1885 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 PF4P02776 101 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 MRPL53Q96EL3 112 aaKnown RBP8.81□□□□□ -1
NPHP4-202ENST00000378161 UBE2D4Q9Y2X8 147 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 ATP6V0E1O15342 81 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 USMG5Q96IX5 58 aa8.81□□□□□ -1
NPHP4-202ENST00000378161 NDUFS5O43920 106 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 Q6ZSV7 163 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 SEM1Q6ZVN7 128 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 C11orf44Q8N8P7 122 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 PRSS33Q8NF86 280 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 CCL19Q99731 98 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
NPHP4-202ENST00000378161 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
NPHP4-202ENST00000378161 SONP18583 2426 aaKnown RBP8.8□□□□□ -1
NPHP4-202ENST00000378161 IGLV4-69A0A075B6H9 119 aa8.79□□□□□ -1
NPHP4-202ENST00000378161 PSPHP1O15172 72 aa8.79□□□□□ -1
NPHP4-202ENST00000378161 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
NPHP4-202ENST00000378161 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
NPHP4-202ENST00000378161 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
NPHP4-202ENST00000378161 TEX22C9J3V5 150 aa8.79□□□□□ -1
NPHP4-202ENST00000378161 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
NPHP4-202ENST00000378161 IGLV1-47P01700 117 aa8.78□□□□□ -1
NPHP4-202ENST00000378161 LINC00308Q8TCZ7 52 aa8.78□□□□□ -1
NPHP4-202ENST00000378161 SPTBN4Q9H254 2564 aa8.78□□□□□ -1
NPHP4-202ENST00000378161 RHPN1-AS1Q9BWJ2 59 aa8.78□□□□□ -1
NPHP4-202ENST00000378161 WISP2O76076 250 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms