RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 RS1O15537 224 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 INSP01308 110 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 Q6ZSV7 163 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 ATP6V0E2Q8NHE4 81 aa8.52□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGHV3-30-3P0DP02 117 aa8.51□□□□□ -1.05
TNFRSF9-201ENST00000377507 NACAE9PAV3 2078 aa8.51□□□□□ -1.05
TNFRSF9-201ENST00000377507 UBR5O95071 2799 aaPredicted RBP8.51□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGHV1-58A0A0C4DH39 117 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 TINCRA0A1B0GVN0 87 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 A4D1N5 150 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 FHL3Q13643 280 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 CEMP1Q6PRD7 247 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 POLQO75417 2590 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 A0A0B4J2C4 111 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 PSMB2P49721 201 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 TEX29Q8N6K0 151 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 IL17DQ8TAD2 202 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 LITAFQ99732 161 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 SPATA25Q9BR10 227 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
TNFRSF9-201ENST00000377507 ZNF462Q96JM2 2506 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 TCL1BO95988 128 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 KHDC1LQ5JSQ8 128 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 MUSTN1Q8IVN3 82 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 CREBBPQ92793 2442 aa8.49□□□□□ -1.05
TNFRSF9-201ENST00000377507 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGHV3-33P01772 117 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 C1QTNF4Q9BXJ3 329 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 PTPN13Q12923 2485 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 FOXI1Q12951 378 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 C1orf158Q8N1D5 194 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 VSIG2Q96IQ7 327 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 USP24Q9UPU5 2620 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 FAM208BQ5VWN6 2430 aa8.48□□□□□ -1.05
TNFRSF9-201ENST00000377507 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF9-201ENST00000377507 AZU1P20160 251 aa8.47□□□□□ -1.05
TNFRSF9-201ENST00000377507 INSL3P51460 131 aa8.47□□□□□ -1.05
TNFRSF9-201ENST00000377507 SIGMAR1Q99720 223 aa8.47□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.05
TNFRSF9-201ENST00000377507 TRAV8-3A0A0A6YYJ7 113 aa8.46□□□□□ -1.05
TNFRSF9-201ENST00000377507 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.05
TNFRSF9-201ENST00000377507 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.05
TNFRSF9-201ENST00000377507 NAV2Q8IVL1 2488 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 M0QXV9 152 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 SCGB1A1P11684 91 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 TIRAPP58753 221 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 Q6ZUT4 128 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 RNF183Q96D59 192 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 XCL2Q9UBD3 114 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.06
TNFRSF9-201ENST00000377507 LRRK2Q5S007 2527 aa8.45□□□□□ -1.06
TNFRSF9-201ENST00000377507 CCL24O00175 119 aa8.45□□□□□ -1.06
TNFRSF9-201ENST00000377507 STHQ8IWL8 128 aa8.45□□□□□ -1.06
TNFRSF9-201ENST00000377507 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
TNFRSF9-201ENST00000377507 TEX15Q9BXT5 2789 aa8.45□□□□□ -1.06
TNFRSF9-201ENST00000377507 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 ADAMTSL4-AS1Q5T5F5 129 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 WFDC11Q8NEX6 87 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 ZNF418Q8TF45 676 aaPredicted RBP8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 ESM1Q9NQ30 184 aa8.44□□□□□ -1.06
TNFRSF9-201ENST00000377507 TRBV10-1A0A0K0K1A3 114 aa8.43□□□□□ -1.06
TNFRSF9-201ENST00000377507 TIMM17BO60830 172 aa8.43□□□□□ -1.06
TNFRSF9-201ENST00000377507 LINC01600Q96MT4 127 aa8.43□□□□□ -1.06
TNFRSF9-201ENST00000377507 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
TNFRSF9-201ENST00000377507 ZNF469Q96JG9 3925 aaPredicted RBP8.43□□□□□ -1.06
TNFRSF9-201ENST00000377507 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 MIAQ16674 131 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 GTSF1LQ9H1H1 148 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 ZFYVE26Q68DK2 2539 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 AKAP9Q99996 3911 aa8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 CMC4P56277 68 aaPredicted RBP8.42□□□□□ -1.06
TNFRSF9-201ENST00000377507 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms