RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 HIST1H2BCP62807 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST2H2BEQ16778 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BHQ93079 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 KIR2DL4Q99706 377 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BNQ99877 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 HIST1H2BMQ99879 126 aa14.6□□□□□ -0.07
CBWD3-202ENST00000377342 NXT2Q9NPJ8 142 aaKnown RBP14.6□□□□□ -0.07
CBWD3-202ENST00000377342 MRPS16Q9Y3D3 137 aaKnown RBP14.6□□□□□ -0.07
CBWD3-202ENST00000377342 TMEM97Q5BJF2 176 aa14.59□□□□□ -0.07
CBWD3-202ENST00000377342 CHCHD7Q9BUK0 85 aa14.59□□□□□ -0.07
CBWD3-202ENST00000377342 IGHV1-24A0A0C4DH33 117 aa14.58□□□□□ -0.08
CBWD3-202ENST00000377342 FCER1GP30273 86 aa14.58□□□□□ -0.08
CBWD3-202ENST00000377342 AMTP48728 403 aa14.58□□□□□ -0.08
CBWD3-202ENST00000377342 WFDC10BQ8IUB3 73 aa14.58□□□□□ -0.08
CBWD3-202ENST00000377342 PRSS3P2Q8NHM4 247 aa14.58□□□□□ -0.08
CBWD3-202ENST00000377342 TRBV25-1A0A075B6N4 114 aa14.57□□□□□ -0.08
CBWD3-202ENST00000377342 LINC01546A6NGU7 62 aa14.57□□□□□ -0.08
CBWD3-202ENST00000377342 ESDP10768 282 aa14.57□□□□□ -0.08
CBWD3-202ENST00000377342 Q0VG73 95 aa14.57□□□□□ -0.08
CBWD3-202ENST00000377342 UPK3BQ9BT76 320 aa14.57□□□□□ -0.08
CBWD3-202ENST00000377342 LINC00310P59036 64 aa14.56□□□□□ -0.08
CBWD3-202ENST00000377342 C1orf196B1AJZ1 125 aa14.55□□□□□ -0.08
CBWD3-202ENST00000377342 UBE2DNLQ8IWF7 75 aa14.55□□□□□ -0.08
CBWD3-202ENST00000377342 TMEM243Q9BU79 118 aa14.55□□□□□ -0.08
CBWD3-202ENST00000377342 FA2HQ7L5A8 372 aa14.54□□□□□ -0.08
CBWD3-202ENST00000377342 NIT1Q86X76 327 aa14.54□□□□□ -0.08
CBWD3-202ENST00000377342 Q8N3U1 123 aa14.54□□□□□ -0.08
CBWD3-202ENST00000377342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-202ENST00000377342 IGKV2-29A2NJV5 120 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-202ENST00000377342 K7EMI3 77 aa14.53□□□□□ -0.08
CBWD3-202ENST00000377342 LAGE3Q14657 143 aa14.53□□□□□ -0.08
CBWD3-202ENST00000377342 LGALS9CQ6DKI2 356 aa14.53□□□□□ -0.08
CBWD3-202ENST00000377342 CHCHD5Q9BSY4 110 aa14.53□□□□□ -0.08
CBWD3-202ENST00000377342 TRAV8-6A0A0B4J262 113 aa14.52□□□□□ -0.08
CBWD3-202ENST00000377342 RNASEKQ6P5S7 137 aaKnown RBP14.52□□□□□ -0.08
CBWD3-202ENST00000377342 LINC00476Q8WZB0 136 aa14.52□□□□□ -0.08
CBWD3-202ENST00000377342 AP5S1Q9NUS5 200 aa14.52□□□□□ -0.08
CBWD3-202ENST00000377342 LINC00614P0C842 121 aa14.52□□□□□ -0.09
CBWD3-202ENST00000377342 BAGE3Q86Y29 109 aa14.52□□□□□ -0.09
CBWD3-202ENST00000377342 C20orf203Q8NBC4 194 aa14.52□□□□□ -0.09
CBWD3-202ENST00000377342 GAGE6Q13070 117 aa14.51□□□□□ -0.09
CBWD3-202ENST00000377342 ORMDL2Q53FV1 153 aa14.51□□□□□ -0.09
CBWD3-202ENST00000377342 A0A096LNJ9 63 aa14.5□□□□□ -0.09
CBWD3-202ENST00000377342 SERF1AO75920 110 aa14.5□□□□□ -0.09
CBWD3-202ENST00000377342 RPL39P62891 51 aaKnown RBP14.5□□□□□ -0.09
CBWD3-202ENST00000377342 RAB5BP61020 215 aa14.49□□□□□ -0.09
CBWD3-202ENST00000377342 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
CBWD3-202ENST00000377342 DNAH6Q9C0G6 4158 aa14.49□□□□□ -0.09
CBWD3-202ENST00000377342 CHCHD1Q96BP2 118 aaKnown RBP14.49□□□□□ -0.09
CBWD3-202ENST00000377342 SIVA1O15304 175 aa14.48□□□□□ -0.09
CBWD3-202ENST00000377342 NUPR1O60356 82 aa14.48□□□□□ -0.09
CBWD3-202ENST00000377342 DNAH10OSP0CZ25 163 aa14.48□□□□□ -0.09
CBWD3-202ENST00000377342 H7C423 109 aa14.47□□□□□ -0.09
CBWD3-202ENST00000377342 UBE2L6O14933 153 aa14.47□□□□□ -0.09
CBWD3-202ENST00000377342 PMCHL1Q16048 86 aa14.47□□□□□ -0.09
CBWD3-202ENST00000377342 LINC01556Q5JQF7 62 aa14.47□□□□□ -0.09
CBWD3-202ENST00000377342 FGF6P10767 208 aa14.46□□□□□ -0.09
CBWD3-202ENST00000377342 COA6Q5JTJ3 125 aaKnown RBP14.46□□□□□ -0.09
CBWD3-202ENST00000377342 C2orf66Q6UXQ4 117 aa14.46□□□□□ -0.09
CBWD3-202ENST00000377342 Q8N976 141 aa14.46□□□□□ -0.09
CBWD3-202ENST00000377342 Q9H8V8 135 aa14.46□□□□□ -0.09
CBWD3-202ENST00000377342 UBE2D4Q9Y2X8 147 aa14.46□□□□□ -0.09
CBWD3-202ENST00000377342 SACSQ9NZJ4 4579 aa14.46□□□□□ -0.1
CBWD3-202ENST00000377342 LY6G6CO95867 125 aa14.46□□□□□ -0.1
CBWD3-202ENST00000377342 BTF3P20290 206 aaKnown RBP14.46□□□□□ -0.1
CBWD3-202ENST00000377342 MRPL52Q86TS9 123 aaKnown RBP14.46□□□□□ -0.1
CBWD3-202ENST00000377342 KMT2AQ03164 3969 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 IGHV3-30P01768 117 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 IGHV3-33P01772 117 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 IGHV3-30-5P0DP03 117 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 RBX1P62877 108 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 CYSLTR1Q9Y271 337 aa14.45□□□□□ -0.1
CBWD3-202ENST00000377342 IGLV4-60A0A075B6I1 120 aa14.44□□□□□ -0.1
CBWD3-202ENST00000377342 TMEM262E9PQX1 116 aa14.44□□□□□ -0.1
CBWD3-202ENST00000377342 TOMM6Q96B49 74 aa14.44□□□□□ -0.1
CBWD3-202ENST00000377342 A0A087WX48 190 aa14.43□□□□□ -0.1
CBWD3-202ENST00000377342 HSBP1O75506 76 aa14.43□□□□□ -0.1
CBWD3-202ENST00000377342 NDUFA6P56556 154 aa14.43□□□□□ -0.1
CBWD3-202ENST00000377342 FAM104AQ969W3 186 aa14.43□□□□□ -0.1
CBWD3-202ENST00000377342 KRTAP1-5Q9BYS1 174 aa14.43□□□□□ -0.1
CBWD3-202ENST00000377342 A0A1B0GUV1 79 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 PKIAP61925 76 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 FAM19A2Q8N3H0 131 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 TMEM18Q96B42 140 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 TIMM21Q9BVV7 248 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 HBDP02042 147 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 AMMECR1LQ6DCA0 310 aa14.42□□□□□ -0.1
CBWD3-202ENST00000377342 ZNF25P17030 456 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-202ENST00000377342 SPANXA1Q9NS26 97 aa14.41□□□□□ -0.1
CBWD3-202ENST00000377342 IGIPA6NJ69 53 aa14.4□□□□□ -0.1
CBWD3-202ENST00000377342 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
CBWD3-202ENST00000377342 Q6ZUT4 128 aa14.39□□□□□ -0.11
CBWD3-202ENST00000377342 OPRPNQ99935 248 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-202ENST00000377342 PYGO1Q9Y3Y4 419 aa14.39□□□□□ -0.11
CBWD3-202ENST00000377342 LCE6AA0A183 80 aa14.39□□□□□ -0.11
CBWD3-202ENST00000377342 G0S2P27469 103 aa14.39□□□□□ -0.11
CBWD3-202ENST00000377342 PDZD11Q5EBL8 140 aa14.39□□□□□ -0.11
CBWD3-202ENST00000377342 OR5A1Q8NGJ0 315 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms