RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
CRNKL1-202ENST00000377340 A0A0J9YWU9 116 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 ZFAND2AQ8N6M9 145 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 STPG4Q8N801 248 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 NANOS2P60321 138 aaKnown RBP6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 ZNF747Q9BV97 191 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 MIFP14174 115 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
CRNKL1-202ENST00000377340 PLNP26678 52 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 OCIAD2Q56VL3 154 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 LY6G6CO95867 125 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 DNAL4O96015 105 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 SIVA1O15304 175 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
CRNKL1-202ENST00000377340 RPL39P62891 51 aaKnown RBP6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 PMVKQ15126 192 aa6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 C20orf78Q9BR46 151 aa6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 CRIP2P52943 208 aaPredicted RBP6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 TTC32Q5I0X7 151 aa6.25□□□□□ -1.41
CRNKL1-202ENST00000377340 B5MCH6 92 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 FGF6P10767 208 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 MRGPRG-AS1Q2M3A8 158 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 PRR9Q5T870 116 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 TMEM141Q96I45 108 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 HIVEP1P15822 2718 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 LYRM9A8MSI8 78 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 CEMP1Q6PRD7 247 aaPredicted RBP6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 HIST3H2BBQ8N257 126 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 MRPL35Q9NZE8 188 aaKnown RBP6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 DAZ2Q13117 558 aaKnown RBP6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 DAZ4Q86SG3 579 aaKnown RBP6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 DAZ3Q9NR90 486 aaKnown RBP6.24□□□□□ -1.41
CRNKL1-202ENST00000377340 TRAV4A0A0B4J268 109 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 SPINK8P0C7L1 97 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 KIR2DL5BA0A0G2JN68 375 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 KIR2DL5BA0A0G2JPC4 375 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 CRIP1P50238 77 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 KIR2DL5AQ8N109 375 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 ZNF664Q8N3J9 261 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 EDA2RQ9HAV5 297 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 NHP2Q9NX24 153 aaKnown RBP6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 LRBAP50851 2863 aa6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 MRPS16Q9Y3D3 137 aaKnown RBP6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 UTP20O75691 2785 aaKnown RBP6.23□□□□□ -1.41
CRNKL1-202ENST00000377340 MYMXA0A1B0GTQ4 84 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 A0A096LNT2 108 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 C19orf71A6NCJ1 209 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 RBMY1BA6NDE4 496 aaKnown RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 RBMY1EA6NEQ0 496 aaKnown RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 RBMY1DP0C7P1 496 aaKnown RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 RBMY1A1P0DJD3 496 aaKnown RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 RBMY1CP0DJD4 496 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 KPRPQ5T749 579 aaPredicted RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 ZFP2Q6ZN57 461 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 Q8N976 141 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 COL27A1Q8IZC6 1860 aaPredicted RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 A0A0J9YXV3 536 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 IGLV2-8P01709 118 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 GAGE2EQ4V326 116 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 OPRPNQ99935 248 aaPredicted RBP6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 GAGE2DQ9UEU5 116 aa6.22□□□□□ -1.41
CRNKL1-202ENST00000377340 CAMK2N2Q96S95 79 aa6.21□□□□□ -1.41
CRNKL1-202ENST00000377340 C11orf21Q9P2W6 132 aa6.21□□□□□ -1.41
CRNKL1-202ENST00000377340 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 LOC100131303A0A0U1RQF7 123 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 FSHBP01225 129 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 ODF3Q96PU9 254 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 MLST8Q9BVC4 326 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 SLC25A20O43772 301 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 Q0VG73 95 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 Q8N2B8 174 aa6.21□□□□□ -1.42
CRNKL1-202ENST00000377340 CTRLP40313 264 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 LECT2O14960 151 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 RBX1P62877 108 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 Q6ZWC4 215 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 ZANQ9Y493 2812 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 UBE2BP63146 152 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 LINC00269Q8N2A0 174 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 NKAPP1Q8N9T2 125 aa6.2□□□□□ -1.42
CRNKL1-202ENST00000377340 ORAOV1Q8WV07 137 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms