RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 TMEM223A0PJW6 202 aa11.18□□□□□ -0.62
MSH5-203ENST00000375750 ZNF22P17026 224 aaPredicted RBP11.18□□□□□ -0.62
MSH5-203ENST00000375750 CFHR3Q02985 330 aa11.18□□□□□ -0.62
MSH5-203ENST00000375750 SPXQ9BT56 116 aa11.18□□□□□ -0.62
MSH5-203ENST00000375750 A8MZ25 164 aa11.17□□□□□ -0.62
MSH5-203ENST00000375750 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
MSH5-203ENST00000375750 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
MSH5-203ENST00000375750 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
MSH5-203ENST00000375750 FLNAP21333 2647 aaKnown RBP11.17□□□□□ -0.62
MSH5-203ENST00000375750 ID1P41134 155 aa11.17□□□□□ -0.62
MSH5-203ENST00000375750 NPC2P61916 151 aa11.17□□□□□ -0.62
MSH5-203ENST00000375750 SONP18583 2426 aaKnown RBP11.17□□□□□ -0.62
MSH5-203ENST00000375750 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 Q6ZSV7 163 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
MSH5-203ENST00000375750 H3BUA1 57 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 TCTEX1D4Q5JR98 221 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 KNCNA6PVL3 124 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 RHODO00212 210 aa11.16□□□□□ -0.62
MSH5-203ENST00000375750 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 IGLV4-3A0A075B6K6 122 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 LEPROTO15243 131 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 SLC25A20O43772 301 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 Q1RN00 199 aa11.15□□□□□ -0.62
MSH5-203ENST00000375750 A0A0J9YX75 114 aa11.15□□□□□ -0.63
MSH5-203ENST00000375750 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.63
MSH5-203ENST00000375750 BRI3O95415 125 aa11.15□□□□□ -0.63
MSH5-203ENST00000375750 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.63
MSH5-203ENST00000375750 C20orf203Q8NBC4 194 aa11.15□□□□□ -0.63
MSH5-203ENST00000375750 TRBV20-1A0A075B6N2 111 aa11.14□□□□□ -0.63
MSH5-203ENST00000375750 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
MSH5-203ENST00000375750 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
MSH5-203ENST00000375750 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
MSH5-203ENST00000375750 PSMB8P28062 276 aa11.14□□□□□ -0.63
MSH5-203ENST00000375750 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
MSH5-203ENST00000375750 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
MSH5-203ENST00000375750 SYNJ2BPP57105 145 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 LYRM7Q5U5X0 104 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 FAM104AQ969W3 186 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 RNF183Q96D59 192 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 VCX2Q9H322 139 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 ACANP16112 2415 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 NACAE9PAV3 2078 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
MSH5-203ENST00000375750 PRSS2P07478 247 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 ADAMTSL4-AS1Q5T5F5 129 aa11.12□□□□□ -0.63
MSH5-203ENST00000375750 IGHV3-30-3P0DP02 117 aa11.11□□□□□ -0.63
MSH5-203ENST00000375750 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
MSH5-203ENST00000375750 I3L3M4 83 aa11.11□□□□□ -0.63
MSH5-203ENST00000375750 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
MSH5-203ENST00000375750 CD28P10747 220 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 RHOHQ15669 191 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 Q6ZSN1 163 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 TEX49A0A1B0GTD5 131 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 K7EMT4 169 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 M0R2P5 195 aa11.1□□□□□ -0.63
MSH5-203ENST00000375750 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
MSH5-203ENST00000375750 K7EQG2 157 aa11.09□□□□□ -0.63
MSH5-203ENST00000375750 CRLF1O75462 422 aa11.09□□□□□ -0.63
MSH5-203ENST00000375750 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
MSH5-203ENST00000375750 TRIAP1O43715 76 aa11.09□□□□□ -0.63
MSH5-203ENST00000375750 SNRPD3P62318 126 aaKnown RBP11.09□□□□□ -0.63
MSH5-203ENST00000375750 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
MSH5-203ENST00000375750 DAND5Q8N907 189 aa11.08□□□□□ -0.64
MSH5-203ENST00000375750 LITAFQ99732 161 aa11.08□□□□□ -0.64
MSH5-203ENST00000375750 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
MSH5-203ENST00000375750 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
MSH5-203ENST00000375750 TIMM21Q9BVV7 248 aa11.07□□□□□ -0.64
MSH5-203ENST00000375750 YAE1D1Q9NRH1 226 aa11.07□□□□□ -0.64
MSH5-203ENST00000375750 LINC01620Q4KN68 170 aa11.07□□□□□ -0.64
MSH5-203ENST00000375750 A0A0B4J2C4 111 aa11.06□□□□□ -0.64
MSH5-203ENST00000375750 NF1P21359 2839 aa11.06□□□□□ -0.64
MSH5-203ENST00000375750 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
MSH5-203ENST00000375750 DEFB136Q30KP8 78 aa11.06□□□□□ -0.64
MSH5-203ENST00000375750 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
MSH5-203ENST00000375750 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
MSH5-203ENST00000375750 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
MSH5-203ENST00000375750 MYO9AB2RTY4 2548 aa11.05□□□□□ -0.64
MSH5-203ENST00000375750 DUX3Q96PT4 197 aa11.05□□□□□ -0.64
MSH5-203ENST00000375750 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 SMR3AQ99954 134 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 ANAPC13Q9BS18 74 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 NDUFA12Q9UI09 145 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 NOTCH2Q04721 2471 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
MSH5-203ENST00000375750 DNAJC9-AS1A6NH13 148 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 ZFAND6Q6FIF0 208 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 A0A0U1RRA0 63 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 RBMY1BA6NDE4 496 aaKnown RBP11.03□□□□□ -0.64
MSH5-203ENST00000375750 RBMY1EA6NEQ0 496 aaKnown RBP11.03□□□□□ -0.64
MSH5-203ENST00000375750 RBMY1DP0C7P1 496 aaKnown RBP11.03□□□□□ -0.64
MSH5-203ENST00000375750 DEFB131AP59861 70 aa11.03□□□□□ -0.64
MSH5-203ENST00000375750 Q8N2B8 174 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms