RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TMEM70Q9BUB7 260 aa8.18□□□□□ -1.1
LSM2-208ENST00000375661 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
LSM2-208ENST00000375661 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
LSM2-208ENST00000375661 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
LSM2-208ENST00000375661 RPS10P46783 165 aaKnown RBP8.17□□□□□ -1.1
LSM2-208ENST00000375661 LELP1Q5T871 98 aa8.17□□□□□ -1.1
LSM2-208ENST00000375661 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
LSM2-208ENST00000375661 URGCP-MRPS24S4R325 110 aa8.17□□□□□ -1.1
LSM2-208ENST00000375661 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 J3QL48 77 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 NCR2O95944 276 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 WFDC10BQ8IUB3 73 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
LSM2-208ENST00000375661 NTN5Q8WTR8 489 aaPredicted RBP8.16□□□□□ -1.1
LSM2-208ENST00000375661 TRBV6-5A0A0K0K1A5 114 aa8.15□□□□□ -1.1
LSM2-208ENST00000375661 S100PP25815 95 aa8.15□□□□□ -1.1
LSM2-208ENST00000375661 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
LSM2-208ENST00000375661 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.1
LSM2-208ENST00000375661 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
LSM2-208ENST00000375661 NRACQ8N912 160 aa8.15□□□□□ -1.1
LSM2-208ENST00000375661 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
LSM2-208ENST00000375661 TMEM136Q6ZRR5 245 aa8.14□□□□□ -1.11
LSM2-208ENST00000375661 FAT1Q14517 4588 aa8.14□□□□□ -1.11
LSM2-208ENST00000375661 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
LSM2-208ENST00000375661 IGLV5-52A0A0A0MRZ9 124 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 TRBV6-8A0A0A6YYG3 113 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 SDHAF1A6NFY7 115 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
LSM2-208ENST00000375661 ELOBQ15370 118 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 DEFB104AQ8WTQ1 72 aa8.13□□□□□ -1.11
LSM2-208ENST00000375661 TRBV24-1A0A075B6N3 115 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
LSM2-208ENST00000375661 D6R8Y8 96 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 CKS2P33552 79 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 YPEL4Q96NS1 127 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 ST20Q9HBF5 79 aa8.12□□□□□ -1.11
LSM2-208ENST00000375661 LRCOL1A6NCL2 159 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 PSCAO43653 123 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 TNFRSF6BO95407 300 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 PPP1R17O96001 155 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 PPBPP02775 128 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
LSM2-208ENST00000375661 TMEM97Q5BJF2 176 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 LINC01556Q5JQF7 62 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 Q8N3U1 123 aa8.11□□□□□ -1.11
LSM2-208ENST00000375661 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.11□□□□□ -1.11
LSM2-208ENST00000375661 I3L3M4 83 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 NPYP01303 97 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 SUMO2P61956 95 aaKnown RBP8.1□□□□□ -1.11
LSM2-208ENST00000375661 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 NIT1Q86X76 327 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 CBLN2Q8IUK8 224 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 ORMDL3Q8N138 153 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 GNB1LQ9BYB4 327 aa8.1□□□□□ -1.11
LSM2-208ENST00000375661 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 TRBV27A0A0K0K1C4 114 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 PHOX2AO14813 284 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 HLA-DQA1P01909 254 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 IGHV3-30-3P0DP02 117 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 PMCHP20382 165 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 HAMPP81172 84 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 COTL1Q14019 142 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 COX19Q49B96 90 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 Q8N814 137 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 PRELID3AQ96N28 172 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 SMCO4Q9NRQ5 59 aa8.09□□□□□ -1.11
LSM2-208ENST00000375661 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 VCYO14598 125 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 TSHBP01222 138 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 APCSP02743 223 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
LSM2-208ENST00000375661 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
LSM2-208ENST00000375661 AMTP48728 403 aa8.07□□□□□ -1.12
LSM2-208ENST00000375661 GAGE6Q13070 117 aa8.07□□□□□ -1.12
LSM2-208ENST00000375661 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
LSM2-208ENST00000375661 CHCHD7Q9BUK0 85 aa8.07□□□□□ -1.12
LSM2-208ENST00000375661 MRPL18Q9H0U6 180 aaKnown RBP8.07□□□□□ -1.12
LSM2-208ENST00000375661 PRSS47A8MTI9 375 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 IBA57-AS1B1ANH7 110 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 MT-ND6P03923 174 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 ESDP10768 282 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 SMIM2Q9BVW6 85 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 LAMTOR2Q9Y2Q5 125 aa8.06□□□□□ -1.12
LSM2-208ENST00000375661 A0A087WX48 190 aa8.05□□□□□ -1.12
LSM2-208ENST00000375661 FABP9Q0Z7S8 132 aa8.05□□□□□ -1.12
LSM2-208ENST00000375661 Q6ZSA8 131 aa8.05□□□□□ -1.12
LSM2-208ENST00000375661 Q8N976 141 aa8.05□□□□□ -1.12
LSM2-208ENST00000375661 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms