RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 P0DMU3 169 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 SPXQ9BT56 116 aa10.22□□□□□ -0.77
HMGCL-203ENST00000374490 J3QQQ9 107 aa10.21□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1A1P0DJD3 496 aaKnown RBP10.21□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1CP0DJD4 496 aa10.21□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1FQ15415 496 aaKnown RBP10.21□□□□□ -0.78
HMGCL-203ENST00000374490 ZNRF2Q8NHG8 242 aa10.21□□□□□ -0.78
HMGCL-203ENST00000374490 VCX2Q9H322 139 aa10.21□□□□□ -0.78
HMGCL-203ENST00000374490 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 TMEM223A0PJW6 202 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 EMP1P54849 157 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 TMEM61Q8N0U2 210 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 KLHL30-AS1Q8NEE0 82 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 ZNF418Q8TF45 676 aaPredicted RBP10.2□□□□□ -0.78
HMGCL-203ENST00000374490 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
HMGCL-203ENST00000374490 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 J3QR89 54 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 INSP01308 110 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 MAP6D1Q9H9H5 199 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 MRPL16Q9NX20 251 aaKnown RBP10.19□□□□□ -0.78
HMGCL-203ENST00000374490 PGPEP1Q9NXJ5 209 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 SVEP1Q4LDE5 3571 aa10.19□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1BA6NDE4 496 aaKnown RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1EA6NEQ0 496 aaKnown RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 RBMY1DP0C7P1 496 aaKnown RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 RPL24P83731 157 aaKnown RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 COTL1Q14019 142 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 GAGE13Q4V321 117 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 KHDC1LQ5JSQ8 128 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 Q6ZSV7 163 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 DLX4Q92988 240 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-203ENST00000374490 ESM1Q9NQ30 184 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 SPANXA1Q9NS26 97 aa10.18□□□□□ -0.78
HMGCL-203ENST00000374490 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
HMGCL-203ENST00000374490 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
HMGCL-203ENST00000374490 CD28P10747 220 aa10.17□□□□□ -0.78
HMGCL-203ENST00000374490 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
HMGCL-203ENST00000374490 AMELXQ99217 191 aa10.17□□□□□ -0.78
HMGCL-203ENST00000374490 RNASE1P07998 156 aaKnown RBP10.16□□□□□ -0.78
HMGCL-203ENST00000374490 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
HMGCL-203ENST00000374490 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
HMGCL-203ENST00000374490 DEFB104AQ8WTQ1 72 aa10.16□□□□□ -0.78
HMGCL-203ENST00000374490 LINC01587Q99440 93 aa10.16□□□□□ -0.78
HMGCL-203ENST00000374490 NBEAL1Q6ZS30 2694 aa10.16□□□□□ -0.78
HMGCL-203ENST00000374490 H3BMG7 143 aa10.15□□□□□ -0.78
HMGCL-203ENST00000374490 HTN1P15515 57 aa10.15□□□□□ -0.78
HMGCL-203ENST00000374490 NDUFA11Q86Y39 141 aa10.15□□□□□ -0.78
HMGCL-203ENST00000374490 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 TMEM238C9JI98 176 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 RS1O15537 224 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 TSPAN13O95857 204 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 IGHV3-53P01767 116 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 HILS1P60008 231 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.79
HMGCL-203ENST00000374490 CFAP126Q5VTH2 177 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 C11orf72Q8NBR9 251 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.79
HMGCL-203ENST00000374490 PRO0461Q9UI25 63 aa10.15□□□□□ -0.79
HMGCL-203ENST00000374490 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
HMGCL-203ENST00000374490 UBE2D3P61077 147 aa10.14□□□□□ -0.79
HMGCL-203ENST00000374490 UBE2D2P62837 147 aa10.14□□□□□ -0.79
HMGCL-203ENST00000374490 TRBV20-1A0A075B6N2 111 aa10.13□□□□□ -0.79
HMGCL-203ENST00000374490 IGHV3-73A0A0B4J1V6 119 aa10.13□□□□□ -0.79
HMGCL-203ENST00000374490 CMC4P56277 68 aaPredicted RBP10.13□□□□□ -0.79
HMGCL-203ENST00000374490 WFDC2Q14508 124 aa10.13□□□□□ -0.79
HMGCL-203ENST00000374490 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.13□□□□□ -0.79
HMGCL-203ENST00000374490 ANK2Q01484 3957 aa10.12□□□□□ -0.79
HMGCL-203ENST00000374490 APOMO95445 188 aa10.12□□□□□ -0.79
HMGCL-203ENST00000374490 C10orf126Q8N4M7 172 aa10.12□□□□□ -0.79
HMGCL-203ENST00000374490 ATP6V0E2Q8NHE4 81 aa10.12□□□□□ -0.79
HMGCL-203ENST00000374490 TIMM21Q9BVV7 248 aa10.12□□□□□ -0.79
HMGCL-203ENST00000374490 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
HMGCL-203ENST00000374490 A0A0B4J2C4 111 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 TINCRA0A1B0GVN0 87 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 FHL3Q13643 280 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 CHCHD7Q9BUK0 85 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 PRO1854Q9UHT4 67 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 CFC1P0CG37 223 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 PROK1P58294 105 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 C16orf95Q9H693 158 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 UBE2D4Q9Y2X8 147 aa10.11□□□□□ -0.79
HMGCL-203ENST00000374490 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
HMGCL-203ENST00000374490 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
HMGCL-203ENST00000374490 STHQ8IWL8 128 aa10.1□□□□□ -0.79
HMGCL-203ENST00000374490 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
HMGCL-203ENST00000374490 IGHV3-30-3P0DP02 117 aa10.09□□□□□ -0.79
HMGCL-203ENST00000374490 PSMB2P49721 201 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 ODF3L2Q3SX64 289 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 ETDBQ3ZM63 59 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 Q6ZSN1 163 aa10.08□□□□□ -0.8
HMGCL-203ENST00000374490 C3orf56Q8N813 242 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms